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Conserved domains on  [gi|23510313|ref|NP_700472|]
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wiskott-Aldrich syndrome protein family member 2 [Mus musculus]

Protein Classification

WH2 domain-containing protein (domain architecture ID 10490927)

WH2 domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
WH2 pfam02205
WH2 motif; The WH2 motif (for Wiskott Aldrich syndrome homology region 2) has been shown in ...
433-459 3.90e-04

WH2 motif; The WH2 motif (for Wiskott Aldrich syndrome homology region 2) has been shown in WASP and Scar1 (mammalian homolog) to be the region that interacts with actin.


:

Pssm-ID: 308040  Cd Length: 28  Bit Score: 39.41  E-value: 3.90e-04
                          10        20
                  ....*....|....*....|....*..
gi 23510313   433 SDARSDLLSAIRQGFQLRRVEEQREQE 459
Cdd:pfam02205   2 GGGRGALLADIRAGGKLKKVEETNDRS 28
 
Name Accession Description Interval E-value
WH2 pfam02205
WH2 motif; The WH2 motif (for Wiskott Aldrich syndrome homology region 2) has been shown in ...
433-459 3.90e-04

WH2 motif; The WH2 motif (for Wiskott Aldrich syndrome homology region 2) has been shown in WASP and Scar1 (mammalian homolog) to be the region that interacts with actin.


Pssm-ID: 308040  Cd Length: 28  Bit Score: 39.41  E-value: 3.90e-04
                          10        20
                  ....*....|....*....|....*..
gi 23510313   433 SDARSDLLSAIRQGFQLRRVEEQREQE 459
Cdd:pfam02205   2 GGGRGALLADIRAGGKLKKVEETNDRS 28
WH2 smart00246
Wiskott Aldrich syndrome homology region 2; Wiskott Aldrich syndrome homology region 2 / ...
435-452 2.04e-03

Wiskott Aldrich syndrome homology region 2; Wiskott Aldrich syndrome homology region 2 / actin-binding motif


Pssm-ID: 128542  Cd Length: 18  Bit Score: 37.18  E-value: 2.04e-03
                           10
                   ....*....|....*...
gi 23510313    435 ARSDLLSAIRQGFQLRRV 452
Cdd:smart00246   1 ARSALLAQIRQGKKLKKV 18
 
Name Accession Description Interval E-value
WH2 pfam02205
WH2 motif; The WH2 motif (for Wiskott Aldrich syndrome homology region 2) has been shown in ...
433-459 3.90e-04

WH2 motif; The WH2 motif (for Wiskott Aldrich syndrome homology region 2) has been shown in WASP and Scar1 (mammalian homolog) to be the region that interacts with actin.


Pssm-ID: 308040  Cd Length: 28  Bit Score: 39.41  E-value: 3.90e-04
                          10        20
                  ....*....|....*....|....*..
gi 23510313   433 SDARSDLLSAIRQGFQLRRVEEQREQE 459
Cdd:pfam02205   2 GGGRGALLADIRAGGKLKKVEETNDRS 28
WH2 smart00246
Wiskott Aldrich syndrome homology region 2; Wiskott Aldrich syndrome homology region 2 / ...
435-452 2.04e-03

Wiskott Aldrich syndrome homology region 2; Wiskott Aldrich syndrome homology region 2 / actin-binding motif


Pssm-ID: 128542  Cd Length: 18  Bit Score: 37.18  E-value: 2.04e-03
                           10
                   ....*....|....*...
gi 23510313    435 ARSDLLSAIRQGFQLRRV 452
Cdd:smart00246   1 ARSALLAQIRQGKKLKKV 18
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.16
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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