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Conserved domains on  [gi|2039095199|emb|CAG6144270|]
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Staphylococcal protein of uncharacterised function (DUF960) [Streptococcus pneumoniae]

Protein Classification

DUF960 domain-containing protein( domain architecture ID 10532955)

DUF960 domain-containing protein

Graphical summary

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List of domain hits

 Name Accession Description Interval E-value
DUF960 pfam06124
Staphylococcal protein of unknown function (DUF960); This family consists of several ...
 8-101 3.53e-33

Staphylococcal protein of unknown function (DUF960); This family consists of several hypothetical proteins from several species of Staphylococcus. The function of this family is unknown.


:

Pssm-ID: 399258  Cd Length: 94  Bit Score: 110.39  E-value: 3.53e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2039095199   8 MRSASFGIVTSLPDDIIDSFWYIIDHFLKNVFELEEELEFQLLNNQGKITFHFSSQHLPTAIDFDFNHPFDPRYPPRVLV 87
Cdd:pfam06124   1 SRYATRGVVESLPLELQDSLWLIIDQMLKGVFPLDYLQIFELSNNNGKLTIVHSQEVPEYELEYDLPFPYDPEYPAKVYV 80

                          90
                  ....*....|....
gi 2039095199  88 LDMDGRETILLPEE 101
Cdd:pfam06124  81 IDDGDHETMLLPEE 94
 
Name Accession Description Interval E-value
DUF960 pfam06124
Staphylococcal protein of unknown function (DUF960); This family consists of several ...
 8-101 3.53e-33

Staphylococcal protein of unknown function (DUF960); This family consists of several hypothetical proteins from several species of Staphylococcus. The function of this family is unknown.


Pssm-ID: 399258  Cd Length: 94  Bit Score: 110.39  E-value: 3.53e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2039095199   8 MRSASFGIVTSLPDDIIDSFWYIIDHFLKNVFELEEELEFQLLNNQGKITFHFSSQHLPTAIDFDFNHPFDPRYPPRVLV 87
Cdd:pfam06124   1 SRYATRGVVESLPLELQDSLWLIIDQMLKGVFPLDYLQIFELSNNNGKLTIVHSQEVPEYELEYDLPFPYDPEYPAKVYV 80

                          90
                  ....*....|....
gi 2039095199  88 LDMDGRETILLPEE 101
Cdd:pfam06124  81 IDDGDHETMLLPEE 94
 
Name Accession Description Interval E-value
DUF960 pfam06124
Staphylococcal protein of unknown function (DUF960); This family consists of several ...
 8-101 3.53e-33

Staphylococcal protein of unknown function (DUF960); This family consists of several hypothetical proteins from several species of Staphylococcus. The function of this family is unknown.


Pssm-ID: 399258  Cd Length: 94  Bit Score: 110.39  E-value: 3.53e-33
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2039095199   8 MRSASFGIVTSLPDDIIDSFWYIIDHFLKNVFELEEELEFQLLNNQGKITFHFSSQHLPTAIDFDFNHPFDPRYPPRVLV 87
Cdd:pfam06124   1 SRYATRGVVESLPLELQDSLWLIIDQMLKGVFPLDYLQIFELSNNNGKLTIVHSQEVPEYELEYDLPFPYDPEYPAKVYV 80

                          90
                  ....*....|....
gi 2039095199  88 LDMDGRETILLPEE 101
Cdd:pfam06124  81 IDDGDHETMLLPEE 94
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.21
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Wang J et al. (2023), "The conserved domain database in 2023", Nucleic Acids Res.51(D)384-8.
  • Lu S et al. (2020), "The conserved domain database in 2020", Nucleic Acids Res.48(D)265-8.
  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
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