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Conserved domains on  [gi|1117990|gb|AAA83269|]
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cyclin E, partial [Homo sapiens]

Protein Classification

Cyclin_C domain-containing protein (domain architecture ID 10503098)

Cyclin_C domain-containing protein

Graphical summary

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List of domain hits

Name Accession Description Interval E-value
Cyclin_C pfam02984
Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a ...
1-83 4.38e-12

Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a Uracil-DNA glycosylase that is related to other cyclins. Cyclins contain two domains of similar all-alpha fold, of which this family corresponds with the C-terminal domain.


:

Pssm-ID: 308564  Cd Length: 120  Bit Score: 58.41  E-value: 4.38e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1117990      1 LLDLCVLDVDCLEFPYGILAASALYH--------FSSSELMQKVSGYQWCDIENCVKWMVPFamVIRETGSSKLKHFRGV 72
Cdd:pfam02984  29 LLELTLLDYDFLKYPPSLIAAAALYLarktlgpsPPWTETLEHYTGYSEEDLKPCVKLLLEL--LLNAPSSKLQAVRRKY 106
                          90
                  ....*....|.
gi 1117990     73 ADEDAHNIQTH 83
Cdd:pfam02984 107 SSSKFMKVSTL 117
 
Name Accession Description Interval E-value
Cyclin_C pfam02984
Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a ...
1-83 4.38e-12

Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a Uracil-DNA glycosylase that is related to other cyclins. Cyclins contain two domains of similar all-alpha fold, of which this family corresponds with the C-terminal domain.


Pssm-ID: 308564  Cd Length: 120  Bit Score: 58.41  E-value: 4.38e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1117990      1 LLDLCVLDVDCLEFPYGILAASALYH--------FSSSELMQKVSGYQWCDIENCVKWMVPFamVIRETGSSKLKHFRGV 72
Cdd:pfam02984  29 LLELTLLDYDFLKYPPSLIAAAALYLarktlgpsPPWTETLEHYTGYSEEDLKPCVKLLLEL--LLNAPSSKLQAVRRKY 106
                          90
                  ....*....|.
gi 1117990     73 ADEDAHNIQTH 83
Cdd:pfam02984 107 SSSKFMKVSTL 117
 
Name Accession Description Interval E-value
Cyclin_C pfam02984
Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a ...
1-83 4.38e-12

Cyclin, C-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human CCNO is a Uracil-DNA glycosylase that is related to other cyclins. Cyclins contain two domains of similar all-alpha fold, of which this family corresponds with the C-terminal domain.


Pssm-ID: 308564  Cd Length: 120  Bit Score: 58.41  E-value: 4.38e-12
                          10        20        30        40        50        60        70        80
                  ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 1117990      1 LLDLCVLDVDCLEFPYGILAASALYH--------FSSSELMQKVSGYQWCDIENCVKWMVPFamVIRETGSSKLKHFRGV 72
Cdd:pfam02984  29 LLELTLLDYDFLKYPPSLIAAAALYLarktlgpsPPWTETLEHYTGYSEEDLKPCVKLLLEL--LLNAPSSKLQAVRRKY 106
                          90
                  ....*....|.
gi 1117990     73 ADEDAHNIQTH 83
Cdd:pfam02984 107 SSSKFMKVSTL 117
 
Blast search parameters
Data Source: Precalculated data, version = cdd.v.3.16
Preset Options:Database: CDSEARCH/cdd   Low complexity filter: no  Composition Based Adjustment: yes   E-value threshold: 0.01

References:

  • Marchler-Bauer A et al. (2017), "CDD/SPARCLE: functional classification of proteins via subfamily domain architectures.", Nucleic Acids Res.45(D)200-3.
  • Marchler-Bauer A et al. (2015), "CDD: NCBI's conserved domain database.", Nucleic Acids Res.43(D)222-6.
  • Marchler-Bauer A et al. (2011), "CDD: a Conserved Domain Database for the functional annotation of proteins.", Nucleic Acids Res.39(D)225-9.
  • Marchler-Bauer A, Bryant SH (2004), "CD-Search: protein domain annotations on the fly.", Nucleic Acids Res.32(W)327-331.
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