2QBY,2QBY,2V1U,1W5S


Conserved Protein Domain Family
Cdc6_C

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smart01074: Cdc6_C 
Click on image for an interactive view with Cn3D
CDC6, C terminal
The C terminal domain of CDC6 assumes a winged helix fold, with a five alpha-helical bundle (alpha15-alpha19) structure, backed on one side by three beta strands (beta6-beta8). It has been shown that this domain acts as a DNA-localisation factor, however its exact function is, as yet, unknown. Putative functions include: (1) mediation of protein-protein interactions and (2) regulation of nucleotide binding and hydrolysis. Mutagenesis studies have shown that this domain is essential for appropriate Cdc6 activity.
Statistics
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PSSM-Id: 215013
Aligned: 80 rows
Threshold Bit Score: 54.1775
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2QBY_A       292 LMAVVSIS-SEENVvSTTGAVYETYLNICKKLGVEAVTQRRVSDIINELDMVGILTAKVVNRGRYGKTKEIGLAVDKNII 370  Sulfolobus sol...
XP_314072    372 ICSLMLMLkHGKNKdITVGKLYDVYKAICTKRNIQAVDQTEFISLCTLVETRGIVRLQGKK---EPRMHRVCLQWDEQEV 448  Anopheles gamb...
XP_002093426 608 LCTLVLMLrNERNKdISMGRLHEVYRRVCAKRNILALDQAEFTGTVDLVETRGILRIM---RKKEPRLHKVLLQWDEEEV 684  Drosophila yakuba
XP_001661096 358 vcalllilkASKNKdITVGKLHQVYKAVCAKRNLLSVDQTEFSNLCSLVETRGILRLQGKK---EPRLNRVQLQWDEEEV 434  yellow fever m...
AAF82194     380 iiCAAAKAfRGSKKdATVGELNKLYLEICKSWMISPAGITEFTNMCTVLNDQGIL---KVGQARRDKLKRVSLRVDESDI 456  thale cress
XP_002715672 808 LRAILAEFrRSGLEeATFQQIYSQHVALCRMEGLPYPTMSETMAVCSRLGSCRLLLVESS---RNDLLLRVRLNVSQDDV 884  rabbit
NP_001026457 775 fKAILAEFrRVGVEeATVQQVYRQHIALCRMEGMQSPTVSDILAICARLGACRLLLLESSSK---YLHMRVRLNISQDDV 851  chicken
AAI55209     829 LRAVIAEFrRLGLEeATFQQVFVQHQALCRVEGLQPVSVSEGLLVCQRLGSCRLLLLEGS---RLDLFLRIRLNVSQDDV 905  zebrafish
AAC47802     837 LQAIAAEVtRTGVEeTTFMGVYQQVETIAAFMGVTFPPPGRALRLCSKLGAERLIISEHS---RNDLFQKILLNVSADDI 913  fruit fly
XP_315055    789 LQAVTAEVtRTGIEeCNFLGVYSQFESLAAFSGIIVPNPGRAMAICARLAASRLLICEC---GKSDIYQKILLNISTDDV 865  Anopheles gamb...
2QBY_A       371 VRS 373  Sulfolobus solfataricus
XP_314072    449 TSA 451  Anopheles gambiae str. PEST
XP_002093426 685 HAA 687  Drosophila yakuba
XP_001661096 435 HNA 437  yellow fever mosquito
AAF82194     457 TFA 459  thale cress
XP_002715672 885 LYA 887  rabbit
NP_001026457 852 MYA 854  chicken
AAI55209     906 LYA 908  zebrafish
AAC47802     914 HYA 916  fruit fly
XP_315055    866 HFA 868  Anopheles gambiae str. PEST
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