Conserved Protein Domain Family
CBM_25

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smart01066: CBM_25 
Carbohydrate binding domain
Statistics
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PSSM-Id: 198134
Aligned: 19 rows
Threshold Bit Score: 74.7
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001184965  380 EDTVKLYYNKRSGPlTNSKELWLHGGF--NNWVDglsivvkLVNAELKdvdpKS-GN--Ww--------FAEVVVP-GGA 445  thale cress
NP_631083     149 GNRATVYYSTR--T-LGWTTANIHYRPagGSWTA-------VPGVGMR----AA-CA--Gw--------WKKDVDL-GAA 202  Streptomyces ...
NP_631083      41 GNTATVFYYT--KT-KNWDRYNLHYAPdgGSWTE-------VPGVAME----AA-CT--Dw--------VKRTVPL-GSA 94   Streptomyces ...
CAA39096      863 aNDITIYYKTS------WTNPHIHYSLnqEAWTT-------LPGVPLN----SSeYE--Gy--------AKITIET-EEG 914  Bacillus sp.
NP_001184965  547 GNPVTVLYNPANTVlNGKPEVWFRGSF--NRWTHrl---gpLPPQKME----AT-DDesSh--------VKTTAKVpLDA 608  thale cress
YP_001307807  585 SKTTTIYYNGNLA--ANSTSVILHWGY--NDFTN-------PTDVTMT----KQ-SD--Gr--------WAATITIpSAT 638  Clostridium b...
YP_001307807  492 GNSFTLYYSGSLA---NSSSVKLHWGY--NGFLN-------PSDVTMT----KG-SD--Gf--------WAATIKIpSSA 544  Clostridium b...
YP_909571     535 DKTITIYYKP--AD-STWKTPKVHYGLg-DDWNQ--------PEADMT----LD-EQ--Gy--------YRATIDT-K-G 585  Bifidobacteri...
YP_001392105   36 rismpVNYNT-LDT-SKIKNATLHYGV--NGWKD-------VKDVQLN----RS-IV--DyymgktfesFYTTIYV-EKG 96   Clostridium b...
YP_078828      57 GNTVEIYYQPSNEElTANPNAYLDAGF------T-------EEDIRSL----KS-LE--G---------VKHVVA--KTT 105  Bacillus lich...
NP_001184965  446 LVIDWVF--AD-GppkgAFLYDN-NGYQDFHALVP 476  thale cress
NP_631083     203 TSLTAAF--NN-G----NGVWDN-NKGADYTLPAG 229  Streptomyces coelicolor A3(2)
NP_631083      95 EGLRATF--NN-G----SGTWDN-NGGENYALGTG 121  Streptomyces coelicolor A3(2)
CAA39096      915 SQLRAAF--NN-G----RGQWDN-NQGRDYVFHSG 941  Bacillus sp.
NP_001184965  609 YMMDFVFseKE-D----GGIFDN-KNGLDYHLPVv 637  thale cress
YP_001307807  639 YSLNMAF--KN-D----SGSWDS-NSSANYNYSIS 665  Clostridium beijerinckii NCIMB 8052
YP_001307807  545 TKLDFDF--TN-G----S-NWDN-NSSKDWHLqvs 570  Clostridium beijerinckii NCIMB 8052
YP_909571     586 KKIDFVF--HDaD----TDQWENpDGGGNYHANAG 614  Bifidobacterium adolescentis ATCC 15703
YP_001392105   97 SKIDYCF--KQ-EfygeGTKWDN-NNNEDYHIFVT 127  Clostridium botulinum F str. Langeland
YP_078828     106 ESMNARF--RD-E----NTDAAV-NGINDGYISIN 132  Bacillus licheniformis ATCC 14580
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