Conserved Protein Domain Family
CBM_10

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smart01064: CBM_10 
Cellulose or protein binding domain
This domain is found in two distinct sets of proteins with different functions. Those found in aerobic bacteria bind cellulose (or other carbohydrates); but in anaerobic fungi they are protein binding domains, referred to as dockerin domains or docking domains. They are believed to be responsible for the assembly of a multiprotein cellulase/hemicellulase complex, similar to the cellulosome found in certain anaerobic bacteria.
Statistics
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PSSM-Id: 198132
Aligned: 10 rows
Threshold Bit Score: 37.7942
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
ZP_06527509 360 TGGTAPNGY-PYCVNggasdpDGDGWGWENSRSCVV 394 Streptomyces lividans TK24
YP_528108   194 MCNWYGENR-PVCAN------QNTGWGWENNQSCIG 222 Saccharophagus degradans 2-40
YP_526130   406 scgttsDGH-PVCCDaas-dpDGDGWGWENEASCVV 439 Saccharophagus degradans 2-40
YP_529158    85 IPNATINGT-AYCRSnds-dpDGDGWGWENASSCVI 118 Saccharophagus degradans 2-40
YP_528403   182 MCKWYQDAPrPLCNN------QNSGWGWENNQSCIG 211 Saccharophagus degradans 2-40
YP_525540   375 QCNWYGSVY-PLCNN------QASGWGWENQQSCIG 403 Saccharophagus degradans 2-40
YP_526130   472 TCNWYGTQY-PMCTS------TSSGWGWENNQSCIS 500 Saccharophagus degradans 2-40
YP_528530   732 MCNWYGTSI-PLCQT------TNDGWGWENSQSCVS 760 Saccharophagus degradans 2-40
YP_526130   353 SCDWSGTSF-PLCENg-----NTNDWGYENGQSCVG 382 Saccharophagus degradans 2-40
YP_529158   132 YCVIGADTP-SFCTT------DNGSWGYENGAECLS 160 Saccharophagus degradans 2-40
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