3HA1,3OO2,3HUR,1SFT,2ODO,3E5P,1XFC,3B8V,3MUB,2DY3,3CO8


Conserved Protein Domain Family
Ala_racemase_C

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smart01005: Ala_racemase_C 
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Alanine racemase, C-terminal domain
Alanine racemase plays a role in providing the D-alanine required for cell wall biosynthesis by isomerising L-alanine to D-alanine. Proteins contains this domain are found in both prokaryotic and eukaryotic proteins.
Statistics
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PSSM-Id: 214969
Aligned: 306 rows
Threshold Bit Score: 89.434
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3HA1_A       249 ALSLHTKVAHIKQVIKGDGISYNVTYRTKTEEW-IATVAIGYADGWLRRLQ-G-FE-VLVNGKRVPIVGRVTMD--QFMI 322 anthrax
YP_828592    248 ALTWKAKLLAVKDIPEGALVGYGGSFRAPRAMR-IGILGAGYADGMFHRLS-NrGK-VIADGKLTAIIGTVSMD--LTTI 322 Solibacter usit...
ZP_01068488  216 VLSLYAHRLSQRILQKGQSIGYGGIFTAAKDME-VATYDLGYADGLFRYNG-R-GElVLGNGK--AMLGKMSMD--SFSC 288 Campylobacter j...
AEG32756     236 ILRILARPTLVKRLKAGDRVGYGGVYVARGGEW-LATLPVGYADGLPWGAV-R-FV-KGPDGRLLEVAGRISMD--QTTV 309 Thermus thermop...
ZP_07891483  228 VMSLWASRLSTRILKKGQSVGYGGTFTTTEDML-VSTYDVGYGDGFLRLNErK-SY-TTPKG--YKVLGRVSMD--NLSL 300 Arcobacter butz...
YP_001359420 222 VLSLSAKKIATRRLKKGERVGYGGDFTAPEEMT-VSTYDLGYGDGWCRGDS-A-HP--YITAEGLPILGRVSMD--FIIl 294 Sulfurovum sp. ...
NP_906927    229 VLSLWARRITTKSLPKGARIGYGGKSELEEEAKkVSTYDVGYGDGFYR-LN-E-HH-KLLTAQGERILPRVSMD--CLSV 302 Wolinella succi...
YP_001355826 224 VASLWAQKIASRELKKGSRVGYGGVFEAREDMI-ISTYDAGYADGIFRFQK-E-IE----DGK---ILGRVSMD--SILL 291 Nitratiruptor s...
YP_392895    227 VLSLWAKKLSSRKLKSHQRVGYGGDGEILSDGV-VSNYDFGYGEGFLRVCA-N-GY-KTPEG--IELIGRISMD--NSSF 298 Sulfurimonas de...
NP_861047    232 VAALYADRISTRVLPQNARIGYSGCTKMDSKNI-VSTYDIGYGDGFFRVSE-R-HK-VYTA-KGYQILPRLSMDcfSCMC 306 Helicobacter he...
3HA1_A       323 HLP--CEVPLGTKVTL------I---GRQgdeYISATEVAEYSGTINYEIITTISFRVPRIF 373 anthrax
YP_828592    323 DLShtAALGPGDEVTL------LgveGDA---SLDAQQIAKVAGTISYNILCSISSRVHRVY 375 Solibacter usitatus Ellin6076
ZP_01068488  289 ENS-------GEEICV------F---KD-------ADIWADFFHTINYEILVKLNPNIQRVL 327 Campylobacter jejuni subsp. jejun...
AEG32756     310 LLPg----PVGLEAVFevlsadF---GPT---GLLA--WAEARGTLPYEVAVHLSRRLPRRY 359 Thermus thermophilus SG0.5JP17-16
ZP_07891483  301 N-Td------dEKVCI------F---DD-------VRELAKIHDTITYEITTTLNPNIEKEI 339 Arcobacter butzleri JV22
YP_001359420 295 -----ESAKE--ELVI------M---ND-------AQKAARQFGTISYEMTTALSINIERKI 333 Sulfurovum sp. NBC37-1
NP_906927    303 -------VGEREEVCL------M---ED-------ASELARLFDTIPYEVLTRFSPFLKRVV 341 Wolinella succinogenes DSM 1740
YP_001355826 292 E-------GEKKEICI------F---SD-------AKKMARKLGTISYELLVKMPAHLSRTW 330 Nitratiruptor sp. SB155-2
YP_392895    299 LSSk-------DKLLI------F---D-------SALHVATYASTISYEVLTSLKPEIKREI 337 Sulfurimonas denitrificans DSM 1251
NP_861047    307 D---------ESRICV------F---DD-------ANTIAQAFGTITYEILTHLSPFIKRTI 343 Helicobacter hepaticus ATCC 51449
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