Conserved Protein Domain Family
AD

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smart00995: AD 
Anticodon-binding domain
This domain of approximately 100 residues is conserved from plants to humans. It is frequently found in association with Lsm domain-containing proteins.
Statistics
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PSSM-Id: 214962
Aligned: 19 rows
Threshold Bit Score: 94.2924
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_001382509  70 PPFPKKAEDLETHLQECIANFKPNQDLLANKenepshhsrASPIAIKLYEKFVKL--YgpENIQWSGSdNIVIFK-EIKL 146 Pichia stipitis...
EDP49379     117 PVHALDIRALRAREASAIAKLHESEARRGKG---------VTKEAQEIFDAFSRT--M--PA-RWDGP-NIVVAD-AVTI 180 Aspergillus fum...
ACQ57847      79 PLASLNVSKLANRARTEKEDKLSQAYAISAG---------VSVEGQQLFQTIHKT--I--KDCKWQEK-NIIVMD-DVVI 143 Anoplopoma fimbria
XP_501706    112 PVGFVDLDAVKRREGDVVNQEMRKQANKGVG---------VTEQGQEIYDAIAKT--L--P-CRWDGK-SILAVE-EVQI 175 Yarrowia lipoly...
BAH57266      23 DNFSVDLNGLRAKEALAIRQAEADAERMGVG---------VTAEAQSIFDALSKT--L--P-VQWENS-DILVMK-EVRV 86  thale cress
XP_646772    121 slPSLNVQLIIKKQDEVIKKAAQKAMKIGVG---------VTPEAQEIFNSLSRT--L--P-CDWSGE-NIIVLN-EVKI 184 Dictyostelium d...
XP_966107     76 NIPMINKNIVQKIEKKALMDFEKAKLRIGIG---------ITEEAQDLFDFIWKT--H--PDCTWNNK-DILVLNgEVRI 141 Plasmodium falc...
XP_757726    120 QIYPVSLKAAQSREADAIKQSLTKVARTGKD---------VSQLGQQIFDALSKT--L--P-CRWHES-HIIVME-EVVI 183 Ustilago maydis...
NP_499402     89 QNNPVNGTRTTERLDKTLGELTPNLM-KSPA---------ISIRGQQAYLQLKRT--I--PDTCWCGE-DIRVLG-LVLV 152 nematode
XP_457228     83 NVARVPINEIEANLNDSIKNYKNSLLINNPK---------ASPIAIKIFEKFFKLygI--DNVKWQGS-DIILFD-EIRL 149 Debaryomyces ha...
XP_001382509 147 SKP-YTLgksGNIHk--------L-KDNCKHLDEVQRV 174 Pichia stipitis CBS 6054
EDP49379     181 APP-YHV---DDCRs--------IvAGDTAALTRVRKV 206 Aspergillus fumigatus A1163
ACQ57847     144 SPP-YQV---ENCK-----------GKEGSALSHVRKI 166 Anoplopoma fimbria
XP_501706    176 DPP-YNT---LSCKa--------N-KPNSQALAHVKKI 200 Yarrowia lipolytica CLIB122
BAH57266      87 RSP-Y-L---SDCv---------F-GGTDAANNRVKKV 109 thale cress
XP_646772    185 SSP-YNI---ENCT---------G-PENCKSIERVKKV 208 Dictyostelium discoideum AX4
XP_966107    142 KPP-YGP---NDC----------I-AKNDKLKERFATV 164 Plasmodium falciparum 3D7
XP_757726    184 SGPgYDP---ASV------------NVPGYTQEQLQSF 206 Ustilago maydis 521
NP_499402    153 HKP-YEV---SDVTkdakatgfdE-SRAESAVLQVQKI 185 nematode
XP_457228    150 AKP-YTLgksGNIVk--------L-DENSKAMNMVEDV 177 Debaryomyces hansenii CBS767
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