1UI0,1L9G,2BOO,2D3Y,2L3F,2C2P,1UUG,3IKB,3CXM,2ZHX


Conserved Protein Domain Family
UDG

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smart00986: UDG 
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Uracil DNA glycosylase superfamily
Statistics
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PSSM-Id: 214956
Aligned: 637 rows
Threshold Bit Score: 30.0477
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1UI0_A        27 FGEGNPDAKLMIVGEGPG-EEeDKTGr----pFVGK-AGQLLNRILEAA------GIPr--EEVYITNIVKCRPPq---- 88  Thermus thermop...
YP_001043731  59 PMDGGIAAEVLFLLEKPGpMTdASASgragsgFVSRdNDDPTAEAIFRFaakagiARKr----SVIWNTVPWWNGt---- 130 Rhodobacter sph...
NP_293748     30 PAGGGVNSRILCLLEAPGpQAaQSRGgs---gFISMdNDDHTAHTMFQLiadsgvRREq----LLLWNIVPWYVGdd--h 100 Deinococcus rad...
YP_912062     52 PLDGGIVAPMLFLLEAPGpKAvASg-------FISRnNPDETAKNTFLLtkeagiDRKs----TVLWNVVPWYIGsg--s 118 Chlorobium phae...
YP_912656     53 PLDGGINAQVLFLLEAPGpKAvASg-------FVSRdNPDETAKNFFELniaaglDRAa----TVCWNIVPWYIGtg--t 119 Chlorobium phae...
YP_572746     60 IGLGPRAAPLGFFGRDPG--RrEVEHge---pFVGS-GGQKVRAELYRHry--geALPd---FQASLDVGRQYFW----- 123 Chromohalobacte...
YP_001170755  36 IGLGDADAPLCFFGRDPG--ReEVRHge---pFIGS-GGQIVRRVLYRHlh--gaEMPd---FEAGRALGRHYFW----- 99  Pseudomonas stu...
YP_798790     29 IHGCIPSSRIISLGQAPG--IhEERFgk---pFAYT-AGKTLFGWFKKig----iEEEtfrSKVNMSAVCRCFPGkak-s 97  Leptospira borg...
YP_115479      6 VVGQPVVSPVYLVGQAPG--AkEGALgr---pFAWT-AGRTMFRWFANig----lDEEtfrERVYMAAVCRCFPGknpkg 75  Methylococcus c...
YP_001377643  39 VHGPAVASRILLVGQAPG--PhEARFgr---pFAWT-AGKTLFRWLERAtg---aDEQtvrARVYIAAVVRCFPGkttgg 109 Anaeromyxobacte...
1UI0_A        89 -NRAPLPdEAKICtDkWLLKQIELIAP-QiIVPLGAVAAEFFLG--EK---------------VSITKVRGKw--yEWHG 147 Thermus thermop...
YP_001043731 131 --RTIRReEVAAGvD-RLAELLDLLPRaRlVIGVGRKAARAQSLv-------------------qTRGLA---------- 178 Rhodobacter sph...
NP_293748    101 rIRGVKQgEIQEGaD-LLAELIELLPElAvVVTLGRAAASGWARvkG----------------RAVSRTV---------- 153 Deinococcus rad...
YP_912062    119 kIRPATIqDIKPAlD-SLRLLLSMLTKlQsIVLVGCKAALVESDv-----------------rRMHPAIK---------- 170 Chlorobium phae...
YP_912656    120 kIRAAHHdDIRQArE-GLERLLALLPRiRvVALVGKKAASIESEi-----------------lLMLPGVK---------- 171 Chlorobium phae...
YP_572746    124 ---ANTVpYKPRGnKaWSMAVKKRFQPlMaELLIDHWQGRTLITlgREaflwfaigqprdikrELEAFWAREdrfeAVHT 200 Chromohalobacte...
YP_001170755 100 ---INTVpYKPIGnKaWSMAVKRCFQPlMrQLLIDSWHGRHIVTlgREaflwfaigqprearqRLEAFWQREdrftANLD 176 Pseudomonas stu...
YP_798790     98 gDRKPDLeEVKNCs-eFLEFEVRFHKP-ElLIPIGKLAIDQLFEfgKYk----------------LEDVIGKtfsrEFYG 159 Leptospira borg...
YP_115479     76 gDRVPAPqEIERCs-vWLRTELDLLRP-AlIIPVGKLAASRFLTfgQ------------------LGDVVGKrhrvELGG 135 Methylococcus c...
YP_001377643 110 gDRVPSPeECALWr-gFLAREVEILAP-RlVIPVGRLAIQEVLGhtEP-----------------IAAVVGRtlrtQFHG 170 Anaeromyxobacte...
1UI0_A       148 ------------IKVFPMFHPAYLLRNpsr----apGSPKHLTWLDIQ 179 Thermus thermophilus
YP_001043731 179 --------------FLSSMHPSPINRAarpvlwasiPREWEKARLHLD 212 Rhodobacter sphaeroides ATCC 17029
NP_293748    154 --------------TLNSWHPSGQALNg-------hPERYEHLLMTLR 180 Deinococcus radiodurans R1
YP_912062    171 --------------VFKISHPSPLFVNrlp---gnrEKLLEEIKRVAH 201 Chlorobium phaeobacteroides DSM 266
YP_912656    172 --------------VFTTPHPSPQFINr-------lPENRTILFYALT 198 Chlorobium phaeobacteroides DSM 266
YP_572746    201 tplflpdgrggeFRLAPLPHPSPLNQTwfk----rfPALLAARLAALD 244 Chromohalobacter salexigens DSM 3043
YP_001170755 177 idlqdaqghartFTLHSLPHPSPLNQTwfk----rfPALLEARLRQLD 220 Pseudomonas stutzeri A1501
YP_798790    160 v----------rLDWIPLPHPSGLNVWnht---etgKKLIQEALDILK 194 Leptospira borgpetersenii serovar Hardjo-bovis ...
YP_115479    136 v----------rTDLIPLPHPSGASTWh-------rREPGRSLLEQAL 166 Methylococcus capsulatus str. Bath
YP_001377643 171 v----------nVDVLPLPHPSGASTWf-------kMEPGRTLLEDAL 201 Anaeromyxobacter sp. Fw109-5
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