1GZ0


Conserved Protein Domain Family
SpoU_sub_bind

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smart00967: SpoU_sub_bind 
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RNA 2'-O ribose methyltransferase substrate binding
This domain is a RNA 2'-O ribose methyltransferase substrate binding domain.
Statistics
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PSSM-Id: 214943
Aligned: 438 rows
Threshold Bit Score: 29.0412
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1GZ0_A        15 IYGIHAVQALLeRAPERFQEVFILKGRedKRLLPLIHALES----QGVVIQLANRQYLDEKSDGAVHQGIIARVKP 86  Escherichia coli
YP_804221     32 LEGRHPVETAL-EQATEYEFLIVQEDF------DLGELAEQv---DNDKLILVTKEVANHISDTVHDQGIFLIgyi 97  Pediococcus pentosa...
YP_001011774  47 IEGTHLIEEII-KSGNYPSKILTTEKWl-YKNEELSQKF------DPSLIIVVSEEVLASAVSTKNPDGVAALVQs 114 Prochlorococcus mar...
YP_290320     38 AEGEKVVRRAL-RAGYQPRSLLLTRRRr-RVLDDVLDTFQA-------PVYVVDDAVAEQLVGFHIHRGILASFHR 104 Thermobifida fusca YX
YP_460295     37 AEGFKVVQALL-ESRWDVQALLILEEKk-DRWAAFCETLPVs-----LPLYGLTRKEWKGLTQDVSPEGILAVGIT 105 Syntrophus aciditro...
NP_662765     34 AEGLRTVSELL-QSLSDPSMLHALVFD--EKAAG----QLDglerFAGKAWLAGPNEFKRLAQTTSPQGVVAAFRK 102 Chlorobium tepidum TLS
YP_912592     34 AEGLRTVRELC-QNIPDESMLLALLLR--EGEIG----LGGfpeiPEDKLYVMNSEQCSLLSSTAAPQGVIGVFRQ 102 Chlorobium phaeobac...
YP_380029     33 AEGLRTVRELC-QQLPHEDFLVALLLRp-HAEAE----ALTfaqpYAHKLFSITAKECAQLADTTTPSGIFAIFRQ 102 Chlorobium chloroch...
YP_001129885  18 GEGLRTVRELL-LHLPGPDSLVALFLSp-DAEA-----LLPeaeaYRGKVFSVDSADFLRLTGTESPQGVVGAFRQ 86  Prosthecochloris vi...
YP_001484726  31 IEGTHLIEELL-KSGKNPSKILVTEKWl-R-KNQN---LSRkf--hQSLINIVTEEVLASAISTINPDGIAALVEI 98  Prochlorococcus mar...
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