1RSC


Conserved Protein Domain Family
RuBisCO_small

?
smart00961: RuBisCO_small 
Click on image for an interactive view with Cn3D
Ribulose bisphosphate carboxylase, small chain
RuBisCO (ribulose-1,5-bisphosphate carboxylase/oxygenase) is a bifunctional enzyme that catalyses both the carboxylation and oxygenation of ribulose-1,5-bisphosphate (RuBP), thus fixing carbon dioxide as the first step of the Calvin cycle. RuBisCO is the major protein in the stroma of chloroplasts, and in higher plants exists as a complex of 8 large and 8 small subunits. The function of the small subunit is unknown. While the large subunit is coded for by a single gene, the small subunit is coded for by several different genes, which are distributed in a tissue specific manner. They are transcriptionally regulated by light receptor phytochrome. which results in RuBisCO being more abundant during the day when it is required.
Statistics
?
PSSM-Id: 198029
Aligned: 52 rows
Threshold Bit Score: 113.014
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1RSC_M        11 RFETFSYLPPLSDRQIAAQIEYMIEQGFHPLIEFNEHSNPEEFYW--TmwKLPLFDCKSPQQVLDEVRECRSEYGDCYIR 88  Synechococcus sp.
YP_001168903   4 TQGCFSFLPDLTDEQISAQVEYCLSRGWAVSLEYTDAPHPRNTYW--EmwGMPMFDLRDPKGVMMELEECRKAFPDHYIR 81  Rhodobacter sph...
YP_391109     14 TLETFSFLPELTADEIYDQIVYIINQGWSPALEHEEPAKASDHYW--GmwKLPMFGTRDPNEVLAEIDACRQAYPNHLIR 91  Thiomicrospira ...
YP_001021972   4 TQGTFSFLPDLSDEQISRQVSYCLDKGWAIGLEYTDDPHPRNTYW--EmfGNPMFDVQDAAGVMLEVKSCRKTFPNHYIR 81  Methylibium pet...
YP_001416819   4 TQGTFSFLPDLTPAQVRAQVQYCLDQGWAVSVEHTDDPHPRNTYW--EmwGPPMFDLRDAAGVVGEIDGCRNAFPTRYVR 81  Xanthobacter au...
NP_946906      4 TQGCFSFLPDLTDEQIAAQVQYALSKGWAVNLEFTDDPHPRNTYW--DmwGLPMFDLQDAAGVMMELNECRKIYGDRYIR 81  Rhodopseudomona...
YP_001020676  10 TQGQFSFLPDLSDAEITLQIEYGLGKGYAWSVEYTDDPHPRNTYWemY--GNPMFDLHDAAGVLMELNHCRKTFPNHYIR 87  Methylibium pet...
YP_001233963   4 TQGCFSFLPDLTDEQISRQIQYCLDKGWAVNLEYTDDPHPRNTYW--EmwGLPMFDIRDAKAIMSELADCRRIHDDCYIR 81  Acidiphilium cr...
NP_897808     15 TLETFGFLPPMTQDEIYDQIAYIIAQGWSPLVEHVHPSNSMATYW--SywKLPFFGEKDLNVVVSELEACHRAYPDHHVR 92  Synechococcus s...
YP_342388     10 TQGQFSFLPDLTDEQILAQIKYALKNDWAVNVEYTDDPHPRNTYW--EmfGIPMFDLKDPAGIMMEINDCRKTYPNHYVR 87  Nitrosococcus o...
1RSC_M        89 VAGFD--NIK--ECQTVSFIVHRP 108 Synechococcus sp.
YP_001168903  82 INAFD--STRgfETVTMSFIVNRP 103 Rhodobacter sphaeroides ATCC 17025
YP_391109     92 LVGYD--NYT--QCQGHNFVVYRP 111 Thiomicrospira crunogena XCL-2
YP_001021972  82 LTAFD--SSHgtESVVLSFIINRP 103 Methylibium petroleiphilum PM1
YP_001416819  82 VNAFD--STRgwETVRLSFIVQRP 103 Xanthobacter autotrophicus Py2
NP_946906     82 LSAFD--SSHgwESVRLSFIVNRP 103 Rhodopseudomonas palustris CGA009
YP_001020676  88 LMAFD--STRgiESIAMSFIVNRP 109 Methylibium petroleiphilum PM1
YP_001233963  82 LSAFDatNTW--ESLRISFIVQRP 103 Acidiphilium cryptum JF-5
NP_897808     93 IVGYD--AYT--QSQGACFVVfeg 112 Synechococcus sp. WH 8102
YP_342388     88 VTAFN--SHRgvESPCMSFIVNRP 109 Nitrosococcus oceani ATCC 19707
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap