1LNS


Conserved Protein Domain Family
PepX_N

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smart00940: PepX_N 
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X-Prolyl dipeptidyl aminopeptidase PepX, N-terminal
This N-terminal domain adopts a secondary structure consisting of a helical bundle of eight alpha helices and three beta strands, with the last alpha helix connecting to the first strand of the catalytic domain. The first strand of the N-terminus also forms a small parallel beta sheet with strand five of the catalytic domain. This domain mediates dimerisation of the protein, with two proline residues present in the domain being critical for interaction.
Statistics
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PSSM-Id: 198008
Aligned: 22 rows
Threshold Bit Score: 170.151
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1LNS_A         1 MRFNHFSIVDKNFDEQLAELDQLGFRWSVF---WDEKKILKDFLIQSPSD----------MTALQATAELDVIEF-L-KS 65  Lactococcus lac...
YP_194229      1 MKYNQYAYVETDFDNQVRELIDINFLPRNYe-dWSFSDLLAKLVKNAIAEaktdaaksakLSEFAVSDHETLTDF-LkQK 78  Lactobacillus a...
YP_619292      1 MKYNQYAYVETSPEKATEELLAINFLPENYs-sLSFSELLAVLTGNVLAEattrqakdakLAEFAVDDQTDLAAFlL-DT 78  Lactobacillus d...
YP_001272224   1 MKINQFSITSTTPQARRQELMQIHLLRKNEeqtLTPNAMFETFLARIHMAsaqpivtkqwLHDLLATPDLALDDW-F-DQ 78  Lactobacillus r...
YP_536421      1 MKFNQFAHVKVPFEQKLAELNRIAFLHAGDe-dLASNHIYRLFLERAFPNfkteaaknhaLSNLAATENADILTY-L-NS 77  Lactobacillus s...
YP_003923987   1 MKNNQFAIVPTDSETAIAELTKIHFITPDMdalTTVPAVYQALLAKSLPEvhtasglthkFNNIMATSQHTLSEW-L-AD 78  Lactobacillus p...
YP_806866      1 MKLNQFARLTPDFKVQVAELKQIGLQADPDd-tFSQS--TTDLFNAFFPEaytlaakkdkLAQVAVNMDQTLAAW-LaKK 76  Lactobacillus c...
YP_395258      1 MKLNQFARLTTTYSEQIKALQRIKLLDEGYe-aLSVQALAQQIFARFFPEahsktaqneqMQKIQATASLNLADY-L-AG 77  Lactobacillus s...
YP_817995      1 -mINQYGRIAVDSATELEELRAVGF----------NSEDFETLLRRALTNyktyeaqndwLREHVATDEQNIFLF-L-ET 67  Leuconostoc mes...
YP_803918      1 MKNNQFGRIRLDRTTELEELKNIHFIDA-Dl-lADPKAQLKDFLKRSCLVsnseatfqqkLSNLLATPDQTMAAF-F-ES 76  Pediococcus pen...
1LNS_A        66 -SIELDWEIFWNIALQLLDFVPNFDFEIGKAFEYAKNSNLPQIEAE-M-TTENIISAFYYLLCTRRKTGMILVEHWVSEG 142 Lactococcus lac...
YP_194229     79 -PESIGTAQFYNVALQLLGYHVHYDYDFADPTGFMQKTALPFV-QDiN-DTHKLISAFYRLLNTRTKNGQILLDVMAGKG 155 Lactobacillus a...
YP_619292     79 -PTAITASQFANVALQLLGYHPNYDYSLTDPLTCGEKHALPAF-KDlT-SKEELIFAFYRLLNTRSKNGQILLDVMAGKG 155 Lactobacillus d...
YP_001272224  79 -NQILTDEVFYLVALQLLDFEAAVDFDITASLATVKKIGLPVESHQkW-TTANVIDAFYLLLNTHNKNGQSLIDHLTAEG 156 Lactobacillus r...
YP_536421     78 -S-KINARVFYAVGLQLLGFEAELDFDLKDPFSAMDKLNLPYQ-KEiH-HRDDVINAWYDLLCTSTKKGQNLLDILANRG 153 Lactobacillus s...
YP_003923987  79 -ATIVNNQVFYNVGLQLLGFLPGQDFELADPLLAMRDIHLPMVGDSaF-DREALYYAWYLLLNTRGNNGQTLIESLTTRG 156 Lactobacillus p...
YP_806866     77 -PSKMTRRDFYNVALQLLGFEAFTDFDLNDPFKMMTATKLPSLDHDlT-STADLLKAVYLLLNTRTKHLVSYLDDLANRG 154 Lactobacillus c...
YP_395258     78 iSTSFDQRTFYNIALQLLGFKVTTDFQFNHPRRFMAKVGIPYVDQPvL-TQELFLEAVYLLLTTRSQNGLLYLDCLANRG 156 Lactobacillus s...
YP_817995     68 -KQPLTQAVFYCIAAQLLGFTEALAGNGYNGVATFRQLGLPIA------TVNNLRHAWYELLNSHTNNGLLFIDELASQG 140 Leuconostoc mes...
YP_803918     77 -DQPLTLEIFILLELQLLQFEADTDYQIEDPLSAISKIQLPELDLKnFeTSADVAHAWYNLLTTHTKNGEVYLDRLTQQG 155 Pediococcus pen...
1LNS_A       143 L 143 Lactococcus lactis subsp. cremoris MG1363
YP_194229    156 Y 156 Lactobacillus acidophilus NCFM
YP_619292    156 Y 156 Lactobacillus delbrueckii subsp. bulgaricus ATCC 11842
YP_001272224 157 F 157 Lactobacillus reuteri DSM 20016
YP_536421    154 Y 154 Lactobacillus salivarius UCC118
YP_003923987 157 Y 157 Lactobacillus plantarum subsp. plantarum ST-III
YP_806866    155 F 155 Lactobacillus casei ATCC 334
YP_395258    157 F 157 Lactobacillus sakei subsp. sakei 23K
YP_817995    141 Y 141 Leuconostoc mesenteroides subsp. mesenteroides ATCC 8293
YP_803918    156 Y 156 Pediococcus pentosaceus ATCC 25745
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