Conserved Protein Domain Family
NurA

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smart00933: NurA 
NurA nuclease.
This family includes NurA a nuclease exhibiting both single-stranded endonuclease activity and 5'-3' exonuclease activity on single-stranded and double-stranded DNA from the hyperthermophilic archaeon Sulfolobus acidocaldarius.
Statistics
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PSSM-Id: 214920
Aligned: 96 rows
Threshold Bit Score: 42.9146
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_578897     45 SSIYAVDG----SRSVSRL---------SGTVIYFLSALA-------VGS-------------------G-KQL------ 78  Pyrococcus furi...
YP_001056184  55 GDVHGLDS----HTVVVDF---------GGVSVIVATGAL-------VGR-------------------V-SGVvpglpa 94  Pyrobaculum cal...
NP_558473     54 pvdYAVDG----SLRTITTp--------TFRLFLAVGVAYtklgiltIPG-------------------F-RDVkh---- 97  Pyrobaculum aer...
NP_213668     56 lKIAFIDGvr-rTENIVYLedpnsasvvEGAFVSIGAGAM-------VLS-------------------Y-GKVns---- 103 Aquifex aeolicu...
YP_001153341  73 GDVHGLDS----HTSVVEFe---------GVSVIVATGAL-------VGRvlatvpgvaarwlgvrlnfR-GGVel---- 127 Pyrobaculum ars...
NP_294560     47 REVLVVDGkprmEARLLMDddsgelhlaAFGAYVVGAVSL-------CPH-------------------GtRQAel---- 96  Deinococcus rad...
NP_558395     50 GDVHGLDS----HTAVVEF---------EGVSVIVATGAL-------VGR-------------------C-SAFvp---- 85  Pyrobaculum aer...
NP_229537     43 DQIIFVDGkr-rSFVRITTde-----giTGIFAELCVGAV-------IWD-------------------R-EGGtk---- 85  Thermotoga mari...
NP_860571     61 ERVITIDG----GYQEVNIndn----fpSQKLCYYNIGIL-------MFS-------------------V-KDLev---- 101 Helicobacter he...
NP_632221     65 SLFITIDG----GYTEVFIrre----fpSCVLNFFQFGAL-------IFE-------------------L-KDLkt---- 105 Methanosarcina ...
NP_578897     79 -------------------RLS---YANAI----------------KSNYGTSDQI-------------------V---- 97  Pyrococcus furi...
YP_001056184  95 rwlgvrfnfllegglpvgsRLY---WRSAF----------------LDRAFDASFD-------------------L---- 132 Pyrobaculum cal...
NP_558473     98 ------------------vALQ---SDDEE----------------ALRRLEDVAI-------------------Vkyrf 121 Pyrobaculum aer...
NP_213668    104 ------------------lEDS---LKKSV----------------VKRYFLLRDN-------------------V---- 123 Aquifex aeolicu...
YP_001153341 128 ------------------lEGSglyYRSEV----------------LGVPFDAGFD-------------------L---- 150 Pyrobaculum ars...
NP_294560     97 ------------------lDVR---ARRVL----------------AYSSDAPLEParl--------------spR---- 121 Deinococcus rad...
NP_558395     86 ------------------gLSA---SWLGVrlnfkgggdllagsrlYYKSRFLERVfda-------------dfdL---- 127 Pyrobaculum aer...
NP_229537     86 ------------------tLFS---PDKPP----------------VKERVLGFSQ------------------------ 104 Thermotoga mari...
NP_860571    102 ------------------vERQ---QTINPsdigkle--nlerfsfVIPTQNIRLKne---------------dfI---- 139 Helicobacter he...
NP_632221    106 ------------------lSNK---PFIDPedierlk--kierlkfVLPTKNISYKdesltnsvrntfyefftenK---- 158 Methanosarcina ...
NP_578897     98 -------------RMQMETLEN-----MLGYLAYRKLEGEk--------------R-AILMDGT-----LTgslvrppvy 139 Pyrococcus furi...
YP_001056184 133 -------------EAARDEVRL-----HVEGVLAGAWDGG---------------G-TLIVDGP-----VF--------- 164 Pyrobaculum cal...
NP_558473    122 angekffksdvpeDVVGKVVRE-----AVEIALIKEAKGT------------------ALIDGP-----LY--------- 164 Pyrobaculum aer...
NP_213668    124 -------------DISQPTIVFltqtgKLEFKVDRAKKEL---------------SpYV---NE-----LM--------- 158 Aquifex aeolicu...
YP_001153341 151 -------------EAARDEVRY-----HVEGVLAGVWDGG---------------G-VLLVDGP------V--------- 181 Pyrobaculum ars...
NP_294560    122 -------------NPHTGVLDY-----EPYAFSGRQVEGPraa----------vqK-LMLQDEQklsrqLA--------- 163 Deinococcus rad...
NP_558395    128 -------------EAARDEVRY-----HVEEALARAWDGG---------------G-VLLLDGP-----VF--------- 159 Pyrobaculum aer...
NP_229537    105 -------------SFQEEGYEEv---gGILFKVVKEGKD----------------A-MQSID-------LY--------- 135 Thermotoga mari...
NP_860571    140 -------------STFRKTLYEe---vFLKNYLSEGNEKSsfi---------htiK-WLIFKEY-----LDsnskg--ks 186 Helicobacter he...
NP_632221    159 -------------ENFIETLKW-----FLYREYDSKKEIAsytlsscpnpkcnnkR-IELNKRD-----MS--------- 205 Methanosarcina ...
NP_578897    140 pedIRSLNVMRALIGESDFENLLNEFLEKlrdhyrkveehlEKNGNYDSPILTDNVVEKLR-KK-YIdtkviaygsgkvk 217 Pyrococcus furi...
YP_001056184 165 ---RAAAAAERGGVYGELYRRFIEERVR-------------AFGGRRVVGVVKRLDRSYYL------------------- 209 Pyrobaculum cal...
NP_558473    165 ---Y---------GIRGFPEIDWWRVEALw--------------DKRVVAVVKRLETSKKL-CR-AK------------- 203 Pyrobaculum aer...
NP_213668    159 ---ANLELWVAQQVYKAKMADLMITDGTLhy--------vaKAKNLPFIGYVKKHRKIYLYpEH-IKvl----------- 215 Aquifex aeolicu...
YP_001153341 182 ---FRVPDVYQSGGG------FFRLYLELar--------arAALLRGAVGVVKRVERSRYL-AR---------------- 227 Pyrobaculum ars...
NP_294560    164 ------SPIALEEGEADALPESLVLQDGPvr---------lGGGGSAVVGYVKTLHTDYLG-ADrIGll----------- 216 Deinococcus rad...
NP_558395    160 ----------RALDVLKRGGVYAFLYSEIykr------ryeLFGGRRVVGVVKRVDQSSYL-AK---------------- 206 Pyrobaculum aer...
NP_229537    136 -----MRSLEIEEVRKHMDKNILIVKDGPaar------elpFEENVGPIGLVKNIGVTELS-KEdFK------------- 190 Thermotoga mari...
NP_860571    187 sitFACPHCKKMQTFQKQTPNYLDEQNNFvkcsec-eniiyITDCFDLHTLIDEINGATLI-ESyIMsafeiil------ 258 Helicobacter he...
NP_632221    206 ---ENYLFCCDDCGEKIYLTDVFRLHEVId----------dEFGAGGILAYVTNLLEHILL-IHyIRtil---------- 261 Methanosarcina ...
NP_578897    218 vkiprkaLGYSPRVIPIEV--L--ESSR-----GKSVDELLQELdeekvelylgkddiydalhmtlsyieyLYSIDKLLE 288 Pyrococcus furi...
YP_001056184 210 ------------ARCVGVGanD--EVAA-----LRLLEGRVGFV---------------------------G-------- 235 Pyrobaculum cal...
NP_558473    204 -------EWVEEMGIRIDA--A--CNDM-----AVVAE-LGRMH---------------------------MRSYRDVVV 239 Pyrobaculum aer...
NP_213668    216 -----qeLKVGQRTPIILI--H--SQPT-----MDSQNKSFDKY----------------------------TWYVKLNE 253 Aquifex aeolicu...
YP_001153341 228 ------------CAGVGSD--D--EVAA-----RRLLNN----------------------------------------- 245 Pyrobaculum ars...
NP_294560    217 ------sSLKCGERTPILR--FrvGDRG-----GTFSEAEGREQr--------------------------FTWYVRLCD 257 Deinococcus rad...
NP_558395    207 --------------CVGVG--SddEVAA-----RRLLEGR-------------------------------PGFVGPVVV 234 Pyrobaculum aer...
NP_229537    191 -------------KLRFLK--K--GKRS-----KMFVSSRETPLk-------------------------kVGAYVKLID 223 Thermotoga mari...
NP_860571    259 -mlsmfrFLFEENTIQWLP--K--ILFI-----KDGPLALFSRLddfafki--------------vrpfiqFLYAKSLNE 314 Helicobacter he...
NP_632221    262 -----riKPSLLKETLFIK--EgpLAFFsvtanMHKPMRDLSNYlle----------------------kyDLNLVGVEK 312 Methanosarcina ...
NP_578897    289 VKNLAyiaksfytktlartlgveivdtalldavirtlighekegyleieHaVVPPKWSFPDFLLskfrnieklIDkGIHL 368 Pyrococcus furi...
YP_001056184 236 -------------------------------------------------------PVVVRVGGF---------VK-WMYY 250 Pyrobaculum cal...
NP_558473    240 FGPFK--------------------------------------------QtFRQSKLHPLPERY---------LW-YIYS 265 Pyrobaculum aer...
NP_213668    254 NEGIT--------------------------------------------S------------------------------ 259 Aquifex aeolicu...
YP_001153341 246 SPGYV--------------------------------------------GpVV-VEWEGLRKY--------------LFY 266 Pyrobaculum ars...
NP_294560    258 APFYQh-------------------------------------------------------------------PLaGIMR 270 Deinococcus rad...
NP_558395    235 KWGDL--------------------------------------------------------AKY-------------MYY 245 Pyrobaculum aer...
NP_229537    224 GEGIR--------------------------------------------------------GLV-------------RLE 234 Thermotoga mari...
NP_860571    315 NISYInlvgld--------------------------------ksgmfvEhLKNIESKIPLGSIl-------lPNlDYMK 355 Helicobacter he...
NP_632221    313 SGSFV--------------------------------------------EhAAQIGNKMESGTLl-------lINnNYIY 341 Methanosarcina ...
NP_578897    369 AYVRfeQG-----DVIYMLQS------------------TTN---IEKILPLI---------------LHHK-------A 400 Pyrococcus furi...
YP_001056184 251 VAVPsgRG-----VRVVRVEAl----------------eEGL---AAEAARWVa-------------sLC-D-------P 285 Pyrobaculum cal...
NP_558473    266 A------------SSIFRVEAf----------------rKEY---AEEVLPTLl--------------rNRV-------V 293 Pyrobaculum aer...
NP_213668    260 ---------------VARLEVpae-------------lgLEEavkLANLTAYLm-------------pKFASaefndkrA 298 Aquifex aeolicu...
YP_001153341 267 VAVPapRG-----VRVFRVea----------------leEGL---AEEAASWLg-------------sL-SD-------A 301 Pyrobaculum ars...
NP_294560    271 LEMHapED-----SSFVPAAVqqia-----------dlsGAL---LSKLGSKLh--------------KDSR-------A 310 Deinococcus rad...
NP_558395    246 VGVPsaKG-----IRVLRAEAf----------------dPSL---AREADSWLg--------------SLAD-------S 280 Pyrobaculum aer...
NP_229537    235 TYVKddNQ-----IPYIRKVF-------------------DD---LAKTLPHLta-----------dlPIPR-------L 269 Thermotoga mari...
NP_860571    356 KYITgnNTsvfgeNTYFGIKMfvr-------------keKEL---SFVLDVAIpfdesitykdyikqpKIED-------F 412 Helicobacter he...
NP_632221    342 KYIIpgKAd---pDNPYARTSyyggklifksrderlyvvTIP---VENESVVLd-------------pKKEN-------F 395 Methanosarcina ...
NP_578897    401 GGYLRPLQLAHHGVKI 416 Pyrococcus furiosus DSM 3638
YP_001056184 286 FGVPVPVAVADKIARR 301 Pyrobaculum calidifontis JCM 11548
NP_558473    294 PGLPYHIALVDKLAKD 309 Pyrobaculum aerophilum str. IM2
NP_213668    299 PQNLIPIKYLENYLRR 314 Aquifex aeolicus VF5
YP_001153341 302 SGLPLPLAVADRVARR 317 Pyrobaculum arsenaticum DSM 13514
NP_294560    311 PQNLIPTAALEQAMNR 326 Deinococcus radiodurans R1
NP_558395    281 SGVPVPISAADRLARR 296 Pyrobaculum aerophilum str. IM2
NP_229537    270 PENILPIQFLEENLSY 285 Thermotoga maritima MSB8
NP_860571    413 LSLKNILEVLFRLKCD 428 Helicobacter hepaticus ATCC 51449
NP_632221    396 KNLDSILQNLEQLKCD 411 Methanosarcina mazei Go1
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