2QRR,2QSW,3CED


Conserved Protein Domain Family
NIL

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smart00930: NIL 
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This domain is found at the C-terminus of ABC transporter proteins involved in D-methionine transport as well as a number of ferredoxin-like proteins.
This domain is likely to act as a substrate binding domain. The domain has been named after a conserved sequence in some members of the family.
Statistics
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PSSM-Id: 197998
Aligned: 180 rows
Threshold Bit Score: 41.3413
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2QRR_A        22 SYPLVRXEFTGATVDAPLXSQISRKYN----IDVSILSSDLDYAGGVKFGXXVAELFGN------EQDDSAAIEYLRENN 91  Vibrio parahaem...
YP_062480    264 SGRIVSARIQDDGRLGSVLSDAVGRHC----VRFEIVYGGISALQGRSFGSLTLELIGE------PADVDALIADLRGAT 333 Leifsonia xyli ...
YP_001223027 270 pGRLVTLSFADGGATQAEVFQALAAAG----IAFEVVHGGITDIQGRTFGNLTLALGGD------PARIDEVLAADRA-G 338 Clavibacter mic...
YP_887372    247 D-ELILNVHAGADASGAFIGALVRELN----TDVRILDGEVLRLGGQSVSQFQLALTGIdh--saADRAEEYVRWFERNG 319 Mycobacterium s...
YP_001106312 257 DACLVDVVLVGYAAVGSLLPLAVSRFG----IAMTYLSGGVVPVAGTLVGRFRVSIAGH--------GTGRALDWLASQR 324 Saccharopolyspo...
NP_737240    284 EGRLFTIDLTEDSGFFAAS-AIAADNG----VSINVVHGGVTTLQRQSFGKITVRLTGN------PAAIEEFHRSLTRTT 352 Corynebacterium...
YP_251506    290 NGRLFTVTMAEGIGFFDAI-SKLSAAG----VTVNIVHGGVTTLQNHSFGRLTLRLTAHst--dgEKAIEEFHSHMQDST 362 Corynebacterium...
YP_949140    277 PGQLVSIGIS-EAAPTPLVAATFERHG----VGSSVVFGGVTEIQNKILGTLTYELTGs------DAAIDAALADLGDVT 345 Arthrobacter au...
YP_701728    265 GGRIVTADVRDGSRIGDVLSDAGG-HG----VRFEIVYGGITTLQDRSFGSLTLELVGp------DDGVDDVIRRLRTVT 333 Rhodococcus sp....
ZP_04901883  316 AQLLLDVRYTGASGGEPDLGALTAALArnvgDAVHFVHGGLDRIQGRVQGRLVIAASLAargaagPDRIAAALAAARRHA 395 Burkholderia ps...
2QRR_A        92 VKVEVL 97  Vibrio parahaemolyticus RIMD 2210633
YP_062480    334 EIEEVa 339 Leifsonia xyli subsp. xyli str. CTCB07
YP_001223027 339 VTVTEV 344 Clavibacter michiganensis subsp. michiganensis NCPPB 382
YP_887372    320 LTAVRV 325 Mycobacterium smegmatis str. MC2 155
YP_001106312 325 CAVWEV 330 Saccharopolyspora erythraea NRRL 2338
NP_737240    353 TIK-EI 357 Corynebacterium efficiens YS-314
YP_251506    363 EIE-EI 367 Corynebacterium jeikeium K411
YP_949140    346 AVERQI 351 Arthrobacter aurescens TC1
YP_701728    334 DVEEVQ 339 Rhodococcus sp. RHA1
ZP_04901883  396 NRVEVL 401 Burkholderia pseudomallei S13
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