2RHS,3CMQ,3PCO,1PYS


Conserved Protein Domain Family
FDX-ACB

?
smart00896: FDX-ACB 
Click on image for an interactive view with Cn3D
Ferredoxin-fold anticodon binding domain
This is the anticodon binding domain found in some phenylalanyl tRNA synthetases. The domain has a ferredoxin fold, consisting of an alpha+beta sandwich with anti-parallel beta-sheets (beta-alpha-beta x2).
Statistics
?
PSSM-Id: 214893
Aligned: 283 rows
Threshold Bit Score: 55.8946
Created: 14-Jul-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
2RHS_B       708 PKFPGVTRDIALEVNHD--VPSSELKQIIH-----NNGED---ILQSTLVFDVY-EGeH------L--E-K-GK-KSVAI 765 Staphylococcus ...
YP_001130631 717 SKFPVVQRDLSFILPGG--VSVQSLVDLVR-----ESDG----LIRNVSVFDVF-ER-Q------S--GgE-GE-RSVAL 773 Prosthecochlori...
YP_379842    709 SRFPVVERDISFIIPEG--VSAQSLVELVQ-----S-SNP---LIKTVTVFDRF-ER-N------H--E-S-GKeCSIAL 765 Chlorobium chlo...
YP_911397    709 SKFPVVQRDLSFVLPRS--VTVQSLVRLVR------TSDP---YIRSVSVFDLF-EA-R------E--E-DgGE-RRVAL 765 Chlorobium phae...
NP_867638    586 SSFPSIQRDLNLVLPES--VRWNELAGLVR-----KAAKE---RLADLTYRETY-RN-E------KvdG-P-NK-KRVLF 644 Rhodopirellula ...
YP_374632    710 SKFPAVQRDLSFILPGT--VPVQSLVGLVR-----SSD-P---LIRDVSVFDVFeRG-S------G--G-G-GE-RSVGL 766 Pelodictyon lut...
YP_003127    716 SQFPEAEIDLSILVGEK--ENTNVFTDLVK-----LERIP---ELKEGWVYSQF-MG-Gn-----V--P-E-GK-KSVSY 773 Leptospira inte...
YP_832835    275 SLMPPVRRDLSLVLADPaeADIELLGDRARrvlgdDAEVLaalEIKAVTPTAEL-PP-AavdrlrM--A-P-GD-VNVLL 347 Arthrobacter sp...
YP_589797    578 SRYPAVERDFSFVFD-----DAVTF-DRVReav-------ealGITEMTSFQAV-EI-Frg--gsV--P-A-GK-YSFLV 635 Acidobacteria b...
YP_506312    779 GKFPIVERDFSFVFDLDk-VPLWGDIERGL-----YLISD---FIKNVTLFDKY-EGd------fK--G-K-RM-LSLAF 837 Neorickettsia s...
2RHS_B       766 RLNYLDTEDTLTDERVSKIHDKILEALQAQ-GATIR 800 Staphylococcus haemolyticus
YP_001130631 774 GLDIADYGRTLQDERINDIVLAIGNSAESKlGAVIR 809 Prosthecochloris vibrioformis DSM 265
YP_379842    766 SLTIADAKATLQDEKINDILATISRNAESKlGAVIR 801 Chlorobium chlorochromatii CaD3
YP_911397    766 SMEIADYNGTLHDERINEILLHVGSSAESKlGAVIR 801 Chlorobium phaeobacteroides DSM 266
NP_867638    645 SMELQSQTETLSGGDADSIINELVASCEKQlEAVLl 680 Rhodopirellula baltica SH 1
YP_374632    767 SISIADHSGTLQEGRISEILRTVGVNAESKlGAVIR 802 Pelodictyon luteolum DSM 273
YP_003127    774 RFRLVNYERTFTQERIKEISDQLV-ILAGKnGFVLR 808 Leptospira interrogans serovar Copenhageni str. Fiocruz L1-130
YP_832835    348 RLVLQPLERTLTDQQANRLRDRVY--IALHq---GK 378 Arthrobacter sp. FB24
YP_589797    636 RAAFQSAERTLRDEEVANWSGQIIKAL-EIlGGALR 670 Acidobacteria bacterium Ellin345
YP_506312    838 FVSMENQTHGLSQEEIKSLSDQIICFVQGKfSGTLR 873 Neorickettsia sennetsu str. Miyayama
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap