1JLX,1JLX


Conserved Protein Domain Family
Agglutinin
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smart00791: Agglutinin 
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Amaranthus caudatus agglutinin or amaranthin is a lectin from the ancient South American crop, amaranth grain.
Although its biological function is unknown, it has a high binding specificity for the methyl-glycoside of the T-antigen, found linked to serine or threonine residues of cell surface glycoproteins. The protein is comprised of a homodimer, with each homodimer consisting of two beta-trefoil domains.
Links
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Statistics
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PSSM-Id: 129027
View PSSM: smart00791
Aligned: 5 rows
Threshold Bit Score: 204.373
Threshold Setting Gi: 157878523
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
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PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
1JLX_A   158 FQFPKGYVTFKGNNGKYLGVIT--INQLPCLQFGYDNLNDPKVAHQMFV--TS-NGTICIKSNYMNKF---WRLStDDWI 229 amaranth
AAL05954 159 FQFPKRYVTFKGNNGKYLGVIT--INQLPCLQFGYDNLNDPKVAHEMFV--TS-NGTICIKSTYMNKF---WRLStDDWI 230 amaranth
AAW48295 184 LVLPK-YVAFKGDNDMYLRARI--IQKRNYLEFSSSDIADSTVVNTIFP--NYaNGNVRIKSNHFNRF---WRLS-PNWI 254 bread wheat
AAM09540   2 AGLPVIMCLKSNNNQEYLRYQSdnIQQYGLLQFSADKILDPLAQFEVEPskTY-DGLVHIKSRYTNKYlvrWSPN-HYWI 79  grain amaranth
1JLX_A     1 AGLPVIMCLKSNNHQKYLRYQSdnIQQYGLLQFSADKILDPLAQFEVEPskTY-DGLVHIKSRYTNKYlvrWSPN-HYWI 78  amaranth

1JLX_A   230 LVDGNDPRETNE--AAALFRSDVHD---FNVISLLNMQKTWFIKRFTSGKPgFINCMNAATQNVDE--TAILEIIE 298 amaranth
AAL05954 231 LVDGNDPRETNE--AAALFRSDVHD---FNVISLLNMQKTWFIKRFTSGKPgFINCMNAATQNVDE--TAILEIIG 299 amaranth
AAW48295 255 WADSADT-SSRD--RDTLFRVVMLP----DYIGLQNLGNSRYCKRLTADKK--TSCLNAAVDTITL--EARLRVEE 319 bread wheat
AAM09540  80 TASANEPDENKSnwACTLFKPLYVEegnMKKVRLLHVQLGHYTENYTVGGS-FVSYLFAESSQIDTgsKDVFHVID 154 grain amaranth
1JLX_A    79 TASANEPDENKSnwACTLFKPLYVEegnMKKVRLLHVQLGHYTQNYTVGGS-FVSYLFAESSQIDTgsKDVFHVID 153 amaranth
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