2HAJ


Conserved Protein Domain Family
DnaG_DnaB_bind

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smart00766: DnaG_DnaB_bind 
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DNA primase DnaG DnaB-binding
DnaG_DnaB_bind defines a domain of primase required for functional interaction with DnaB that attracts primase to the replication fork. DnaG_DnaB_bind is responsible for the interaction between DnaG and DnaB.
Statistics
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PSSM-Id: 197866
Aligned: 49 rows
Threshold Bit Score: 71.5235
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2HAJ_A       18 MRILIGLLVQNPELATLVP--PLENLDENKL--------------PGL-GLF----RELV-NTCL-S-----Q-----PG 64  Escherichia coli
ZP_05846137 509 pREVMKLALQEPQLASTIF--DLMPPESFVH--------------PTY-VAM----AEAV-ASLG-G-----AansngGA 560 Corynebacterium ...
NP_940037   485 QREALKIALQYPEHAGEYF--DSLPDDAFTH--------------ESY-AAV----RKAI-VAAG-GcsdaiR-----GS 536 Corynebacterium ...
YP_117679   479 QRQSLCAALQYPAIAGAVF--DALEPEVFTH--------------PAY-AAI----RTMI-AEAG-G-----AscglsGA 530 Nocardia farcini...
YP_288927   508 ERLALKLAVQHPLLCSG-F--DHLDADMFTV--------------EQH-RDV----FHLI-QKAG-G-----TqsvqdPA 558 Thermobifida fus...
EFT31880    479 ERGFLKLALQHPDLFNEEW--DQVEVEDLRH--------------PAY-QAV----FEAVlAVPR-G-----Q-----DR 526 Propionibacteriu...
NP_846740   467 EREIIYHMLQSPEVAVRME----SHIEDFHT--------------EEHkGIL----YELY-AYYE-K-----G-----NE 512 Bacillus anthrac...
YP_074416   483 ERVLLYLLLEHPGLLRTVE--AELGEEPFSD--------------PHH-RQIyragRALL-AEADpL-----A-----GG 534 Symbiobacterium ...
AAN87531    482 WRYLIYWMVGTPERVRWVFerLGNEIPQVQGplqeilealvavsrEGQgVLV----GRVA-EGLV-A-----E-----ET 545 Heliobacillus mo...
NP_626710   488 ERELLKLALQRPELVSPAF--DAYGVDEFTA--------------PPY-AAV----REAI-MEAG-G-----A-----EF 534 Streptomyces coe...
2HAJ_A       65 -----L-TTGQLLEHYR-GTNNAATLEKLSMWDDIADKNIAE--QTFTDSLNHMFDS-L-LELRQEELia----rERthg 129 Escherichia coli
ZP_05846137 561 -----G-WIERIAAQMK-DPMGAAVVSELAVEDLHCLPERLP--YYADAIMARMQER-W-VGSEIADMks----rMQr-m 624 Corynebacterium ...
NP_940037   537 -----T-WLDAVRDNVY-DMVGKSLVSELAVEHIILDEWGLA--AHTDTTLARLMEQ-R-IGNQIAQLk-----gAMqrm 600 Corynebacterium ...
YP_117679   531 -----E-WVNAVADATD-DLTLRALVSELAGAQLPVKSVNDI--PRFITGVLARAQEaY-VGRQIATLks----kLQr-l 595 Nocardia farcini...
YP_288927   559 -----L-WAGQLRETAR-NEAQRTFLTQLAVEPIEIYGELDE--YRAQEIISTIRIH-S-INRQITNLks----rLSr-l 622 Thermobifida fus...
EFT31880    527 -------WTEKVSEATP-DPQVKQLEVALLVE--PVLREEPD--RDYAEAYAARVRL-LsITDDIANLks----rLQr-t 588 Propionibacteriu...
NP_846740   513 -----P-SVGTFLSWLS-DEKLKNIITDIST-DEFINPEYTE--EVLQSHLETLRRH-Q---EKLEKMeiifkikQMekt 578 Bacillus anthrac...
YP_074416   535 -----G-VIARLFDRLS-DPEARQVLTEMAVTPMLTSDPEKE--A--ADCIEKIRKH-R-DSRRLEDLenq--ikAAaaa 599 Symbiobacterium ...
AAN87531    546 kayfsAlLVEDLEGALQeSV--------------------------LEDCVNTLRYG-W-LVEEIARLei----qVEa-l 592 Heliobacillus mo...
NP_626710   535 gvqdpQdYLVRVREAAP-DDTVRAMVTELAVEAIMLHRGVKGvdEVYAGAQLVTVRRrA-VERRIRDItg----rLTr-l 607 Streptomyces coe...
2HAJ_A      130 LSNEERL---ELWTLN 142 Escherichia coli
ZP_05846137 625 RPDLQKE---EYNALF 637 Corynebacterium jeikeium ATCC 43734
NP_940037   601 RPSEDMQ---AYNSLF 613 Corynebacterium diphtheriae NCTC 13129
YP_117679   596 SANEQTD---EYLALF 608 Nocardia farcinica IFM 10152
YP_288927   623 DPVADAE---EYQRIF 635 Thermobifida fusca YX
EFT31880    589 NPNQDRK---LYNAMF 601 Propionibacterium acnes HL005PA2
NP_846740   579 DPVEAAK---YYVAYL 591 Bacillus anthracis str. Ames
YP_074416   600 SRRVDPAiwnEYMALV 615 Symbiobacterium thermophilum IAM 14863
AAN87531    593 SRSGDME---ALQRLL 605 Heliobacillus mobilis
NP_626710   608 SGHGDPA---ELAAVQ 620 Streptomyces coelicolor A3(2)
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