Conserved Protein Domain Family
HDAC_interact

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smart00761: HDAC_interact 
Histone deacetylase (HDAC) interacting
This domain is found on transcriptional regulators. It forms interactions with histone deacetylases.
Statistics
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PSSM-Id: 214808
Aligned: 24 rows
Threshold Bit Score: 96.997
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
XP_002640211  923 CT-LGPSYRLM-KDSKEAACSGRVELEpdiKETLNDKWTSYPSWSSEDTGNQAIKKSNLEEFHFRTEDERYELDIIVDSN 1000 Caenorhabditi...
NP_596012     593 CKsCGPSYRLLpKIELLLPCSGRDDLC---WTILNDAWVSFPTLASEDSGFIAHRKNQFEENLHKLEEERYEYDRHIGAN 669  Schizosacchar...
EEC69795      420 CQrCTPSYRLLpKHYPMPPAGNKTELG---ASVLNDHWVSVTSG-SEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV 495  Indian rice
NP_593646     334 FPeCGPSYRLLpVEERNISCSGRDDFA---WGILNDDWVSHPTWASEESGFIVQRKTPYEEAMTKLEEERYEFDRHIEAT 410  Schizosacchar...
ABR13973      432 CEqCTPSYRLLpKNYPISIASQKTEIG---KLVLNDHWVSVTSG-SEDYSFSHMRKNQYEESLFKCEDDRFELDMLLESV 507  thale cress
NP_001189789  456 CEcCTPSYRLLpADYPIPIASQRSELG---AEVLNDHWVSVTSG-SEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESV 531  thale cress
AAD39565      370 CTqCTPSYRLLpKDYAVEIPSYRNTLG---KKTLNDHLVSVTSG-SEDYSFSHMRKNQYEESLFRCEDDRYEMDMLLGSV 445  thale cress
XP_448217     288 sTeSGPSYKRLsGFETRASCHGRDRLC---HEVLNDEWVGHPVWASEEVGFIAHKKNQYEETLFKVEEERHEYDFFLLSV 364  Candida glabr...
NP_595433     493 FEcISLTYRKLpDSWKQDKCSGRDDLD---NSVLNDDYISVAPKPSHVKN-IMHHENQYLQALQLVEDERYDYDRVLNTT 568  Schizosacchar...
NP_586325     421 YRkEG-SYRILpEEIKEGK---QDPIA---KEVLNFTCVGCPTFESEDSNYVFLKRNVHEEALFRIEDERSEADLAIERI 493  Encephalitozo...
XP_002640211 1001 RTIMEELEKTLTDIEAMSDAERRA 1024 Caenorhabditis briggsae
NP_596012     670 MRFIELLQIHADKMLKMSEVEKAN 693  Schizosaccharomyces pombe 972h-
EEC69795      496 NAATKRVEELIEKMQDNSLKpdsp 519  Indian rice
NP_593646     411 SWTIKSLKKIQNRINELPEEERET 434  Schizosaccharomyces pombe 972h-
ABR13973      508 NSTTKHVEELLTKINSNELKTNSP 531  thale cress
NP_001189789  532 SSAARSAESLLNIITEKKISfsgs 555  thale cress
AAD39565      446 SSAIKQVEILLEKMNNNTISVDST 469  thale cress
XP_448217     365 EHLIVKFTEYEKSLQLSKDDGRRR 388  Candida glabrata CBS 138
NP_595433     569 ESAIKILANFCEPTIHEHLETALQ 592  Schizosaccharomyces pombe 972h-
NP_586325     494 QHLINALEQIIDLNKDSEISMKDI 517  Encephalitozoon cuniculi GB-M1
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