1NZ8,3LPE,3QQC,1M1G


Conserved Protein Domain Family
NGN

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smart00738: NGN 
Click on image for an interactive view with Cn3D
In Spt5p, this domain may confer affinity for Spt4p. It possesses a RNP-like fold.
In Spt5p, this domain may confer affinity for Spt4p.Spt4p
Statistics
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PSSM-Id: 197850
Aligned: 57 rows
Threshold Bit Score: 47.3678
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1NZ8_A       3 EWYAVHTLVGQEEKAKANLEKRIKAFGLQ---------DKIFQVLIPtEEVVelreggkkevvrkklfpGYLFIQMDLgd 73   Thermus thermoph...
O27714      17 SIYALKTSVGQEKNVARMLARKVRDSGIE-----------INAILVP-ESLR-----------------GYILVESSS-- 65   Methanothermobac...
AAK40676    13 NYYAIKVVGGQEINVALMLEERIKTNNIK----------GIYAIIVP-PNLK-----------------GYVVLEAEG-- 62   Sulfolobus solfa...
Q978E9     135 VIVALKTTVGSEVQVATDLNNKAERDRDErsqggekqpSEVFAIMAP-YEIK-----------------GYIFVETMH-- 194  Thermoplasma vol...
Q9V460     215 NLWMVKCRIGEEKATALLLMRKYLTYLNTdd------pLQIKSIIAP-EGVK-----------------GYIYLEAYK-- 268  fruit fly
O80770     170 KLWLVKCAIGREREVAVCLMQKIVDRGSE---------FKIRSAIAL-DHLQ-----------------NYVYIEADM-- 220  thale cress
O13936     241 NIWAVRCKIGKEKDIVFTIMRKAMDLQYTss------pLEIISAFQR-DSLV-----------------GYIYVEARK-- 294  Schizosaccharomy...
Q21338     184 NLWIVKCRMGEEKLVAMHLMRKCLAVEHTne------pfQIKSVVVK-EGLK-----------------GMIYIEAFK-- 237  Caenorhabditis e...
NP_377322    8 NYYAVRVTGGQEINVALMIEERIKTNNIK---------E-VYSIIVP-PNVK-----------------GYVILEATG-- 57   Sulfolobus tokod...
NP_148437    8 RFYAILVTSGAEVNVATIIAERARALGLD-----------IRSIIVP-PRIK-----------------GYVILEAHD-- 56   Aeropyrum pernix K1
1NZ8_A      74 eeePNEAWEVVRGTPGITGFVGA-GMRPVPLSPDEVRHILEV 114  Thermus thermophilus
O27714      66 ---KIDMRNPAIRVPHLRGVVESkTEGEAEIDFEEVKRFLKP 104  Methanothermobacter thermautotrophicus str. Delta H
AAK40676    63 ---LHIVKPLIAGIRNARGLAQGl------LPRDEILKIVSR 95   Sulfolobus solfataricus P2
Q978E9     195 ---PDRISYLAKDIRGYKGMVSGk------IDLEEIAHYLTP 227  Thermoplasma volcanium
Q9V460     269 ---QTHVKTCIDNVGNLRMGKWK----QEMVPIKEMTDVLKV 303  fruit fly
O80770     221 ---EAHVKEAIKGMRNIYANQKI-----LLVPIKEMTAVLSV 254  thale cress
O13936     295 ---QSHVLDALNGVLNVYTNNM------ILVPIKEMPDLLKV 327  Schizosaccharomyces pombe 972h-
Q21338     238 ---QSHVMSAIEGFSALNQFTIT------MVPIKDMVDVLRV 270  Caenorhabditis elegans
NP_377322   58 ---PHVVKLVSQGIRHVRGFAQG------LVQKDDIIKFISK 90   Sulfolobus tokodaii str. 7
NP_148437   57 ---PGDVYDATRGLRHVKRRRPL------ILKFEEVMKLVKP 89   Aeropyrum pernix K1
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