1S29


Conserved Protein Domain Family
LA

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smart00715: LA 
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Domain in the RNA-binding Lupus La protein; unknown function
Statistics
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Aligned: 27 rows
Threshold Bit Score: 83.4368
Threshold Setting Gi: 11245448
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1S29_A       8 SENKQKLQKQVEFYFSDVNVQRDIFLKGKXAENaEGFVSLETLLTFKRVNSVTT--DVKEVVEAIRPS-----E--KLVL 78   Trypanosoma brucei
O01806      10 DDADQKIIKQLEYYFGNINLPRDKFLQEKLKED-DGWVPITTMLNFNRLASISK--DTEKIANAVKNSg---sG--IISV 81   Caenorhabditis e...
Q21992     321 DTLKEYVRKQIEYYFSEENLQKDFFLRRKMGP--EGYLPVALIASFPRVRSLTE--DYSLILEALKDS-----T--KVDM 389  Caenorhabditis e...
O94836     401 ELLKDYIKRQIEYYFSVDNLERDFFLRRKMDA--DGFLPITLIASFHRVQALTT--DISLIFAALKDS-----K--VVEI 469  human
Q9NHN6     457 NSIKEAIKKQVEYYFSVDNLTGDFFLRRKMDP--EGYIPVTLIASFHRVLALTT--DVAVIVNAIKES-----D--KLEL 525  fruit fly
Q9P6K0     323 CDVQAFLTSQLEYYFSIENLCKDMFLRKHMDD--EGYVPLAFLASFNRIKSFST--DLNLLHAACKAS-----D--IIDV 391  Schizosaccharomy...
BAB30957    11 taLEAKICHQIEYYFGDFNLPRDKFLKEQIKLD-EGWVPLETMIKFNRLNRLTT--DFNVIVQALSKSk---aK--LMEV 82   house mouse
Q26457      41 SKLEASTIRQLEYYFGDANLARDKFLQEQISKD-EGWVPVDVLLTFKRLKSLSE--DKKVIVDAIEKS-----DegLIEV 112  Asian tiger mosq...
XP_942285  219 aLLKECIKRQIEHYFNAENSERDYFLRGKRGEQ-D-SLPIFLIAGFQRVQALTT----NLITEALKDS-----T--EVEI 285  human
CAA42379   291 lMAINNIARQIEYYFSEENLTVDNYLRSKLSK--DGFAPLSLISKFYRVVNMSFggDTNLILAALREIvaneaA--TVNV 366  baker's yeast
1S29_A      79 SED-----GLXVRRR 88   Trypanosoma brucei
O01806      82 SED-----NQKIRRN 91   Caenorhabditis elegans
Q21992     390 SPD-----GLQIRAP 399  Caenorhabditis elegans
O94836     470 VDE-----KVRRREE 479  human
Q9NHN6     526 FEGy----KVRTKTT 536  fruit fly
Q9P6K0     392 AIDlqspmSIKVRRK 406  Schizosaccharomyces pombe 972h-
BAB30957    83 SAD-----KTKIRRS 92   house mouse
Q26457     113 SED-----REKLRRH 122  Asian tiger mosquito
XP_942285  286 MNE-----KMRKKNQ 295  human
CAA42379   367 AEG-----TLAAKEG 376  baker's yeast
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