3H0G,1I3Q,2PMZ


Conserved Protein Domain Family
RPOLCX

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smart00659: RPOLCX 
Click on image for an interactive view with Cn3D
RNA polymerase subunit CX
present in RNA polymerase I, II and III
Statistics
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PSSM-Id: 128906
View PSSM: smart00659
Aligned: 17 rows
Threshold Bit Score: 48.1196
Threshold Setting Gi: 11497676
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3H0G_L       20 MIYLCADCGARNTIQ---AKEVIRCRECGHRVMYKMRTKRMVQFEAR 63  Schizosaccharomyces pombe 972h-
XP_002747950 15 MIYICGECHTENEIK---SRDPIRCRECGYRIMYKKRTKRLVVFDAR 58  white-tufted-ear marmoset
AAA80487     20 MIYLCADCGRRNTIQ---AKEVIRCRECGHRVMYKMRTKRMVQFEAR 63  fission yeast
NP_198917     8 VTYVCGDCGQENTLK---SGDVIQCRECGYRILYKKRTRRVVQYEAR 51  thale cress
1I3Q_L       27 LKYICAECSSKLSLS---RTDAVRCKDCGHRILLKARTKRLVQFEAR 70  baker's yeast
NP_175773    17 VIYVCGDCGQENILK---RGDVFQCRDCGFRILYKKRILDKKETRIG 60  thale cress
XP_001713195 27 MEYICSECGMLINIS---DLTSLTCKSCGCRILYKKRSDEVVEYIAR 70  Guillardia theta
BAA31024     32 AVYRCAKCGREVKLDl-sTTRDLRCPYCGSKILYKPRPKIPRRVKAI 77  Pyrococcus horikoshii OT3
2PMZ_P        2 AVYRCGKCWKTFTDEqlkVLPGVRCPYCGYKIIFMVRKPTIKIVKAI 48  Sulfolobus solfataricus
NP_125966     4 AIYRCAKCGREVKIDl-sVTRDLRCPYCGSKILYKPRPKVPRRVKAI 49  Pyrococcus abyssi GE5
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