1D7Q,2DGY,1JT8


Conserved Protein Domain Family
eIF1a

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smart00652: eIF1a 
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eukaryotic translation initiation factor 1A
Statistics
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PSSM-Id: 128900
View PSSM: smart00652
Aligned: 26 rows
Threshold Bit Score: 89.6179
Threshold Setting Gi: 12802364
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
1D7Q_A        27 FKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVglrDYQ--D-NKAD--------VILKYN 95
gi 12842024   20 VPSDHQQIVKVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVdpvEEGe-K-VKAE--------ISFVLC 89
gi 48095      30 nKKKGEMFGIVEKMEGASRLSVMCEDGYTRNARIPGRMRKRMWIREKDLVIVkpwEFQ--P-EKAD--------VVYRNT 98
2DGY_A        11 VPSNQQQIVRVLRTPGNNLHEVETAQGQRFLVSMPSKYRKNIWIKRGDFLIVdpiEEGe-K-VKAE--------ISFVLC 80
gi 15679022   15 TPRRGEIPGVVEQIMGHGKLKVRCADGHIRLGRIPGKMKKRIWIREGDVVLVkpwEFQs-E-EKAD--------IVWRYT 84
1JT8_A        16 RKEENEILGIIEQMLGASRVRVRCLDGKTRLGRIPGRLKNRIWVREGDVVIVkpwEVQg-D-QKCD--------IIWRYT 85
gi 14520807   20 lPEGNQLFGVVEQALGAGWMDVRCEDGKIRRCRIPGKLRRRVWIRVGDLVIVqpwPVQs-D-KRGD--------IVYRYT 89
gi 17566940   20 ELVDEDIIAQVRQSRGNNLHEVLDQNGDSYVVSMPTKFRKSVWLRRDQFVVVrpiTEG--DkVKGE--------IEYILD 89
gi 297823625  18 TLEECQSIAQVVSLRGSNQIEIMDAKGENSLALFPAKFRESMWIRRGSFVVId--HTG--K-EKAQesgskvtsIVCKVL 92
gi 19112189   16 RLEKDQVVAKVVQLKGSALFMVVENNGQELLVEMPPKYRNKIWVRRNGFVIVdksEFLekD-NKIDg------tILYVV- 87
                         90
                 ....*....|....*
1D7Q_A        96 -ADEARSLKAYGELP 109
gi 12842024   90 -KNHVRSLQKEGHWP 103
gi 48095      99 -KTQASYLSRNHMLP 112
2DGY_A        81 -KDHVRSLQKEGFWP 94
gi 15679022   85 -RTESNWLERKGYLK 98
1JT8_A        86 -KTQVEWLKRKGYLd 99
gi 14520807   90 -QTQVDWLLRKGKIt 103
gi 17566940   90 -QDNVLYIRELGKWP 103
gi 297823625  93 fFEQVRLLQKSPEWP 107
gi 19112189   88 -QSPLKNWKKQIYWP 101
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