1VIW,1UOK,1BVZ


Conserved Protein Domain Family
Aamy

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smart00642: Aamy 
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Alpha-amylase domain
Statistics
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PSSM-Id: 214758
Aligned: 218 rows
Threshold Bit Score: 91.2366
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VIW_A        11 NSIVHLFEWK-------WNDIADEcErFLQpQGFGGVQISPPNEYLvad---grpWWERYQPVSYIINT----RSGNESA 76  yellow mealworm
YP_002387425   4 PTLLQCFHWYypeggklWPELAER-AdGFNdIGINMVWLPPAYKGAsggysvgydSYDLFDLGEFDQKGsiptKYGDKAQ 82  Escherichia col...
CAA43194       5 HTMMQFFEWHlaadgdhWKRLAEM-ApELKaKGIDTVWVPPVTKAVsaed-tgygVYDLYDLGEFDQKGtvrtKYGTKQE 82  Bacillus circulans
NP_721927      4 ETMMQYFEWYlpndgkhWQHLAED-AsHLKnIGISKVWMPPAFKGTgsnd-vgygVYDLYDLGEFNQNGtvrtKYGSRED 81  Streptococcus m...
BAA24178       3 ETLMQYFEWYlpndgkhWMRLAAD-ApTLAqKGITKIWMPPAFKAThdgd-vgygVYDLFDLGEFDQKGtirtKYGTKAD 80  Streptococcus e...
A24549        40 GTMMQYFEWYlpddgtlWTKVANE-AnNLSsLGITALWLPPAYKGTsrsd-vgygVYDLYDLGEFNQKGtvrtKYGTKAQ 117 Geobacillus ste...
P19571        40 GTMMQYFEWYlpndgnhWNRLNSD-AsNLKsKGITAVWIPPAWKGAsqnd-vgygAYDLYDLGEFNQKGtvrtKYGTRSQ 117 Bacillus sp. 707
YP_003920231  34 GTLMQYFEWYtpndgqhWKRLQND-AeHLSdIGITAVWIPPAYKGLsqsd-ngygPYDLYDLGEFQQKGtvrtKYGTKSE 111 Bacillus amylol...
AAK00598      53 GTLMQYFEWYapndgnhWNRLRTD-AeNLAqKGITSVWIPPAYKGTtqnd-vgygAYDLYDLGEFNQKGtvrtKYGTKAQ 130 Bacillus megate...
AAF00567      39 GTMMQYFEWYvpndgqqWNRLRTD-ApYLSsVGITAVWTPPAYKGTsqad-vgygPYDLYDLGEFNQKGtvrtKYGTKGE 116 Cytophaga sp.
1VIW_A        77 FTDMTRRCNDAGVRIYVDAVINHMTGmngvgtsgssadhdgmnyp----------------------------------- 121 yellow mealworm
YP_002387425  83 LLAAIDALKRNDIAVLLDVVVNHKMGadekeairvqrvnaddrtqideeiiecegwtrytfparagqysqfiwdfkcfsg 162 Escherichia col...
CAA43194      83 LIEAIAECQKNGIAVYVDLVMNHKAGadetevfkvievdpndrtkeisepfeiegwtkftfp--grgdqyssfkwnsehf 160 Bacillus circulans
NP_721927     82 YLNAVNALKEQEIMPISDIVLNHKANgdakerfqvvkvnpsnrqekisepyeiegwtqfnfp--grqdnysdfkwhwyhf 159 Streptococcus m...
BAA24178      81 YLQAISALKENHIAPLADVVLNHKAAadhtetfsvvevapddrtkiiskpfdiegwtnftfd--grhkayndfewhwyhf 158 Streptococcus e...
A24549       118 YLQAIQAAHAAGMQVYADVVFDHKGGadgtewvdavevnpsdrnqeisgtyqiqawtkfdfn--grgntyssfkwrwyhf 195 Geobacillus ste...
P19571       118 LQAAVTSLKNNGIQVYGDVVMNHKGGadatemvravevnpnnrnqevtgeytieawtrfdfpg-rgnthssfkwrwyhfd 196 Bacillus sp. 707
YP_003920231 112 LQDAIGSLHSRNVQVYGDVVLNHKAGadatedvtavevnpanrnqetseeyqikawtdfrfp--grgntysdfkwhwyhf 189 Bacillus amylol...
AAK00598     131 LKSAIDALHKKNIDVYGDVVMNHKGGadytetvtavevdpsnrnvevsgdyeisawtgfnfp--grgdsysnfkwkwyhf 208 Bacillus megate...
AAF00567     117 LKSAVNTLHSNGIQVYGDVVMNHKAGadytenvtavevnpsnrnqetsgeyniqawtgfnfp--grgttysnfkwqwfhf 194 Cytophaga sp.
1VIW_A       122 --avpygsgdfhspcevnnyQdadnvrncelvglrdlnags---------dyvrgvlidymnhmidlgvaGFrVDAAKhm 190 yellow mealworm
YP_002387425 163 idhienpdedgifkivndytGegwndqvddelgnfdylmgenidf--rnhavteeikywarwvmeqtqcdGFrLDAVKhi 240 Escherichia col...
CAA43194     161 ngtdfdareertgvfriageNkkwnenvddefgnydylmfanidy--nhpdvrremidwgkwlidtlqcgGFrLDAIKhi 238 Bacillus circulans
NP_721927    160 tgvdydalhnengiymilgdNkgwasqenidqengnydylmyddidfkhpevqehlrdwvawfletsgvgGFrLDAIKhi 239 Streptococcus m...
BAA24178     159 tgtdydvktgkngifqiqgdNkgwanqdlvdgengnydylmyadldfkhpevikniydwaewfvettgvcGFrLDAIKhi 238 Streptococcus e...
A24549       196 dgvdwdesrklsriykfrgiGkawdwevdtengnydylmyadldm--dhpevvtelknwgkwyvnttnidGFrLDAVKhi 273 Geobacillus ste...
P19571       197 gvdwdqsrrlnnriykfrghGkawdwevdtengnydylmyadidm--dhpevvnelrnwgvwytntlgldGFrIDAVKhi 274 Bacillus sp. 707
YP_003920231 190 dgadwdesrkisrifkfrgeGkawdwevssengnydylmyadvdy--dhpdvvaetkkwgiwyanelsldGFrIDAAKhi 267 Bacillus amylol...
AAK00598     209 dgtdwdegrklnriykfrgiGkawdwevssengnydylmyadldf--dhpdvanemkkwgtwyanelnldGFrLDAVKhi 286 Bacillus megate...
AAF00567     195 dgtdwdqsrslsrifkfrgtGkawdwevssengnydylmyadidy--dhpdvvnemkkwgvwyanevgldGYrLDAVKhi 272 Cytophaga sp.
1VIW_A       191 spgdlsvifdglknlntdygfadgarpfiyqevidlggeaiskneytgfgcvleFQfgvslgnAFQgGNqlknlanWGpe 270 yellow mealworm
YP_002387425 241 pawfykewiehvqevapkplfiva-----eywshevdklqtyidqvegktmlfdAPlqmkfheASRmGRdydmtqiFTgt 315 Escherichia col...
CAA43194     239 nhefikefaaemirkrgqdfyivg-----efwnsnldacrefldtvdyqidlfdVSlhyklheASLkGRdfdlskiFDdt 313 Bacillus circulans
NP_721927    240 dktfmaqfiryirehlkadlyvfg-----eywkdshfditdylhsvdlqfdlidVMlhmslfeAGQkGSdfdlstiLDds 314 Streptococcus m...
BAA24178     239 dsffmsnfirdmkekygkdfyvfg-----efwngdektnndylattghrfdlidVRlhqnlfeASKeKAhydlrqiFNht 313 Streptococcus e...
A24549       274 kfsffpdwlsyvrsqtgkplftvg-----eywsydinklhnyitktngtmslfdAPlhnkfytASKsGGafdmstlMNnt 348 Geobacillus ste...
P19571       275 kysftrdwinhvrsatgknmfava-----efwkndlgaienylqktnwnhsvfdVPlhynlynASKsGGnydmrniFNgt 349 Bacillus sp. 707
YP_003920231 268 kfsflrdwvqavrqatgkemftva-----eywqnnagklenylnktsfnqsvfdVPlhfnlqaASSqGGgydmrrlLDgt 342 Bacillus amylol...
AAK00598     287 dheylrdwvnhvrqqtgkemfava-----eywqndiqtlnnylakvnynqsvfdAPlhynfhyASKgNGnydmrniLKgt 361 Bacillus megate...
AAF00567     273 kfsflkdwvdnaraatgkemftvg-----eywqndlgalnnylakvnynqslfdAPlhynfyaASTgGGyydmrniLNnt 347 Cytophaga sp.
1VIW_A       271 wgllegldavvfvdnhdnqrtggsqiltyknpkpykmaiafmlahpygttrimssfdFTDn--DqgPPQDgsgnlispgi 348 yellow mealworm
YP_002387425 316 lveadpfhavtlvanhdtqplqaleap--vepwfkplayalillrengvpsvfypdlYGAh-----YEDVggdgqtyp-- 386 Escherichia col...
CAA43194     314 lvqthpthavtfvdnhdsqphealesw--igdwfkpsayaltllrrdgypvvfygdyYGIg----gPEPVdgk------- 380 Bacillus circulans
NP_721927    315 lmkshpdfavtfvdnhdsqrgqalest--vaewfkplayglillrqegipcvfygdyYGIs----gEFAQesf------- 381 Streptococcus m...
BAA24178     314 lvknqpnsavtfvdnhdtqrgqalest--idewfkpaayalillrqtglpcifygdyYGIs----gEFAQqdf------- 380 Streptococcus e...
A24549       349 lmkdqptlavtfvdnhdtepgqalqsw--vdpwfkplayafiltrqegypcvfygdyYGIp-----QYNIpsl------- 414 Geobacillus ste...
P19571       350 vvqrhpshavtfvdnhdsqpeealesf--veewfkplayaltltreqgypsvfygdyYGIp-----THGVpam------- 415 Bacillus sp. 707
YP_003920231 343 vvsrhpekavtfvenhdtqpgqslest--vqtwfkplayafiltresgypqvfygdmYGTkgtS--PKEIpsl------- 411 Bacillus amylol...
AAK00598     362 vvanhptlavtlvenhdsqpgqslesv--vspwfkplayafiltraegypsvfygdyYGTkgnS--NYEIpal------- 430 Bacillus megate...
AAF00567     348 lvasnptkavtlvenhdtqpgqslest--vqpwfkplayafiltrsggypsvfygdmYGTkgtT--TREIpal------- 416 Cytophaga sp.
1VIW_A       349 nddntcsngyvcehrwrqvYG 369 yellow mealworm
YP_002387425 387 -----------idmpiieqLD 396 Escherichia coli IAI1
CAA43194     381 ----------------keiLD 385 Bacillus circulans
NP_721927    382 ----------------qtvLD 386 Streptococcus mutans UA159
BAA24178     381 ----------------qddID 385 Streptococcus equinus
A24549       415 ----------------kskID 419 Geobacillus stearothermophilus
P19571       416 ----------------rskID 420 Bacillus sp. 707
YP_003920231 412 ----------------kdnIE 416 Bacillus amyloliquefaciens DSM7
AAK00598     431 ----------------kdkID 435 Bacillus megaterium
AAF00567     417 ----------------kskIE 421 Cytophaga sp.
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