1EXG,1HEH


Conserved Protein Domain Family
CBD_II

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smart00637: CBD_II 
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CBD_II domain
Statistics
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PSSM-Id: 214754
Aligned: 73 rows
Threshold Bit Score: 30.839
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1EXG_A    14 VNQWNTGFTANVTVKNTSSAp--VDGWTLTFSFPSgQQVTQAWSSTVTQSGS-AVTVRNAPWNGSIPAGGTAQFGFNGsH 90  Cellulomonas fimi
O16028   389 TNTWNGGGQVNFEVKNTGSTtlcGVKFSVTLPAGT--TVAGSWNMNA--AGSnEYTLP--SYINIKAKEANKDAGMTL-- 460 Globodera rostochie...
CAB59144 360 SNTWNGGGQVNFEIKNIGSVplcGVVFSVSLPSGT--TLGGSWNMES--AGSgQYSLP--SWVRIEAGKSSKDAGLTF-- 431 soybean cyst nematode
Q9UA57   416 PDKWDNGARFQLVFKNNASTkkcAVKFSLTFASGQ--QITGIWNVQN--VTGnSFVLP--DYVTIEAGKQYTDAGMNI-- 487 southern root-knot ...
Q9RQB8   258 GDEWGDRFN--VSFTVSGS-----SSWKVAIALSGgQSLQNSWSANVTGSTG-TLTATP-NGSG-------NSFGITVyK 321 Xylanimicrobium pac...
Q56265   260 GQQWNDRYN--LNVNVSGS-----NNWTVTVNVPWpARIIATWNIHASYPDSqTLVARP-NGNG-------NNWGMTImH 324 Thermobifida fusca
P54865   256 AEEWSDRF--NVTYSVSGSSa-----WTVNLALNGsQTIQASWNANVTGSGS-TRTVTPN--------GSGNTFGVTVmK 319 Cellulomonas fimi
AAF04601 257 GEQWSDRYN--LNVSVSGS-----DNWTVTMRVPApEKVMATWNVTASYPDAqTLVARP-NGNG-------NNWGVTIqK 321 Streptomyces thermo...
CAH03685 266 SESWSDRFN--VNYTVSGA-----SSWSVTVNPGSgQSIQNSWNATRNGN---TFTSSG-N----------NTFGVTYyS 324 Cellulomonas flavigena
1HEH_C    11 GEEWADRFN--VTYSVSGS-----SSWVVTLGLNGgQSVQSSWNAALTGSSG-TVTARP-NGSG-------NSFGVTFyK 74  Cellulomonas fimi
1EXG_A    91 TGtNAAPTAF-SLNGTP 106 Cellulomonas fimi
O16028   461 NG-SGKP-TAkVLSTTA 475 Globodera rostochiensis
CAB59144 432 NG-KDKP-TAkNcddee 446 soybean cyst nematode
Q9UA57   488 NG-PATPPQIkVLGDGK 503 southern root-knot nematode
Q9RQB8   322 NGsSTLPTA-------T 331 Xylanimicrobium pachnodae
Q56265   325 NGnWTWPTV-------S 334 Thermobifida fusca
P54865   320 NGsSTTPAAtcagsggg 336 Cellulomonas fimi
AAF04601 322 NGsTTWPTV-------S 331 Streptomyces thermocyaneoviolaceus
CAH03685 325 GGnTNIPSA-------S 334 Cellulomonas flavigena
1HEH_C    75 NGsSATPGA-------T 84  Cellulomonas fimi
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