1W9S,3C7E,1GMM


Conserved Protein Domain Family
CBD_IV

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smart00606: CBD_IV 
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Cellulose Binding Domain Type IV
Statistics
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PSSM-Id: 128869
View PSSM: smart00606
Aligned: 37 rows
Threshold Bit Score: 75.0621
Threshold Setting Gi: 81623364
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1W9S_A          8 LKNPYERIQAEAYDamsgiqTEGTDDDGG----------------------GDNIGWINDGDWVKYERVHFERDAS-SIE 64   Bacillus halo...
O07653        357 KANPGDAIQAESWCqmsgvkTETTSDAGD----------------------GLNVGYIDGGDWMTYSV-NIPTTGTyKVS 413  Cellvibrio mi...
Q9LAP7         24 AQAETLELQAESFAnsggtySDGQPNPvtiyn----------------vngqGAINFVNAGDYVDYN-INAL-GGEyDIE 85   Alteromonas a...
O69822       1015 GYAVLQAEDPDRMEgps-lvKEAYYSDG-------------------------DLGGVTEGAWEQYTDLDFGGVAPrSVS 1068 Streptomyces ...
AAG36763      389 RWRPENHGDSD-YRksdasdVDIYKKATG----------------------N-IVGYNTTGDWLEYS-VDIAEAGDyTAT 443  Fibrobacter s...
YP_003249864  777 pleITDKIQAENYVamdgvqIE--EDSLG----------------------TPNIGWINDGDWTQY-YVNIPAAGSyVLT 831  Fibrobacter s...
YP_003249841  332 deDSENHGDSD-YRkdtgvdL---YKAGD----------------------GVALGYTQTGEWLEYT-VDVKADGEyNID 384  Fibrobacter s...
YP_003249866  413 GDDSENHGDSD-YRkd--tgVDLYKKATG-----------------------VIVGYNSEGDWLEWT-VNVKEAGDyTMF 465  Fibrobacter s...
YP_003249868  404 GDDSENHGDSD-YRkd--tgADLYKKATG-----------------------VALGYNTTGDWYEYT-INIAEAGDyTAI 456  Fibrobacter s...
YP_003249865  351 AITIPGTLEAENYDlggsrvSFYDKSSTNeggayrkdavdivvldsadlskGYALGYTQDGEWLEYT-VNVAKTAKfTVE 429  Fibrobacter s...
1W9S_A         65 VRVASDTPGG----RIEIRTGSPt-GTLLGDVQV--P-NTG--G-WQQWQTV--TGNVQIQ---PGTYDVYLVFKGSPe- 127  Bacillus halo...
O07653        414 YRVAAQAGGG----QLQLEK-AGg-SPVYSNINV--P-ATG--G-WQNWQTI--SHNVVLP---AGEQLIALSAITGG-- 474  Cellvibrio mi...
Q9LAP7         86 YFVGTGVTSGp---NIEVLVDVNgtWQSQGSVAV--PyGS-----WDDFQSLtpSHTVTLP---VGTSTVRLLAVGSTw- 151  Alteromonas a...
O69822       1069 VRYANSQAAAaepsSVDIHAGDAd-GPVVATVSL--P-GTG--G-WQYYTTV--RAAVSDPqalLKASSATFVFHAPSgr 1139 Streptomyces ...
AAG36763      444 ASVAADGSGS-----FKLSID----GKSVGEFDV--T-WTG--SsWDNFIDV--KKKVTLP---AGKHTL-RMDVTAQy- 502  Fibrobacter s...
YP_003249864  832 GRVATGSEKE----SV-ITVTDSt-GKILGTLSVdpA-KSK--G-WNDWYES--STKITLP---AGKQKLTFTYTGEDty 896  Fibrobacter s...
YP_003249841  385 ASVAAGNSTS----AFKLYIDEKa-IT--DDVSV--P-QTAdnS-WDTYKTI--SVKEKVTl--KAGKHVLKLEITANy- 448  Fibrobacter s...
YP_003249866  466 AAVAAAGSTS----SFQLSLDGKa-LTEKITVPA--A-KEGeeN-YDDYNKV--KANVTLP---AG-KHVLRMDVTGAw- 529  Fibrobacter s...
YP_003249868  457 ASVATE-GTG----AFTLSLD----GKSLAEFEV--T-GT---S-YDDFSDV--KKKVTLP---AG-KHVLRLDVTQQy- 513  Fibrobacter s...
YP_003249865  430 VQMATASEKA----GVQLFIDN----KAVSDGII--A-KQGe-D-WSTYTAV--QSQLGEI---AAGEHVLKMQIVGNy- 490  Fibrobacter s...
1W9S_A        128 ---YdlmNVNWFVF 138  Bacillus halodurans
O07653        475 ---F---NINWLKV 482  Cellvibrio mixtus
Q9LAP7        152 --qW---NLESFRL 160  Alteromonas agarilytica
O69822       1140 qwvS---NFDWYQF 1150 Streptomyces coelicolor
AAG36763      503 ---F---DIDYINF 510  Fibrobacter succinogenes subsp. succinogenes S85
YP_003249864  897 --lC---NVDWYNL 905  Fibrobacter succinogenes subsp. succinogenes S85
YP_003249841  449 ---V---NIDWIQF 456  Fibrobacter succinogenes subsp. succinogenes S85
YP_003249866  530 ---F---DVDYFTF 537  Fibrobacter succinogenes subsp. succinogenes S85
YP_003249868  514 ---F---DIDYINF 521  Fibrobacter succinogenes subsp. succinogenes S85
YP_003249865  491 ---V---NIDNIRF 498  Fibrobacter succinogenes subsp. succinogenes S85
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