1JBI


Conserved Protein Domain Family
LCCL

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smart00603: LCCL 
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LCCL domain
Statistics
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PSSM-Id: 128866
View PSSM: smart00603
Aligned: 11 rows
Threshold Bit Score: 108.633
Threshold Setting Gi: 74722335
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1JBI_A          4 IAITCFTRGLDIR---KEKAD---VLCPGGCPLEE---FSVYGNI--VYASVSSICGAAVHRGVISN-SGGPVRVYSLPG 71   human
Q9UDN0         42 PQINCDVKAGKII---DPEFI---VKCPAGCQDPK---YHVYGTD--VYASYSSVCGAAVHSGVLDN-SGGKILVRKVAG 109  human
Q14089        126 LFGHCIQFFWNLS----SVST-----APAGCLLPF---AEISGTIphGYRDSSPLCMAGVHAGVVSNtLGGQISVVISKG 193  human
XP_002807270   30 IAITCFTRGLDIR---KEKAD---VLCPGGCPLEE---FSVYGNI--VYASVSSICGAAVHRGVISN-SGGPVRVYSLPG 97   white-tufted-...
XP_001926638  291 QIVSCEVRLRDQC---KGTTcn-rYECPAGCLDSK---AKVIGSV--HYEMQSSICRAAIHYGIIDN-DGGWVDITRQGR 360  pig
XP_002826760  374 QVVRCDTKMKDRC---KGSTcn-rYQCPAGCLNHK---AKIFGTL--FYESSSSICRAAIHYGILDD-KGGLVDITRNGK 443  Sumatran oran...
XP_519815     392 QAVTCETTVEQLCpfhKPASHcprVYCPRNCMQANphyARVIGTR--VYSDLSSICRAAVHAGVVRN-HGGYVDVMPVDK 468  chimpanzee
XP_001152165  387 QDLDCYTTVAQLCpfeKPATHcprIHCPAHCKDEPsywAPVFGTN--IYADTSSICKTAVHAGVISNeSGGDVDVMPVDK 464  chimpanzee
NP_990268      26 NAITCFTRGLDLR---KETED---VLCPANCPLWQ---FYVFGDG--IYASLSSVCGAAIHRGVITN-AGGAVRVQTLPG 93   chicken
EDL36781       54 IPVTCFTRGLDIR---KEKAD---VLCPGGCSLEE---FSVFGNI--VYASVSSICGAAVHRGVIGT-SGGPVRVYSLPG 121  house mouse
Q26423        391 REVDCDSKAVDFL---DDVGEpvrIHCPAGCSLTA---GTVWGTA--IYHELSSVCRAAIHAGKLPN-SGGAVHVVNNGP 461  Southeast Asi...
1JBI_A         72 RENYSSVDANGIQSQ 86   human
Q9UDN0        110 QSGYKGSYSNGVQSL 124  human
Q14089        194 IPYYESSLANNVTSV 208  human
XP_002807270   98 RENYSSVDANGIQSQ 112  white-tufted-ear marmoset
XP_001926638  361 KHYFIKSNRNGIQTI 375  pig
XP_002826760  444 VPFFVKSERHGVQSL 458  Sumatran orangutan
XP_519815     469 RKTYIASFQNGIFSE 483  chimpanzee
XP_001152165  465 KKTYVGSLRNGVQSE 479  chimpanzee
NP_990268      94 QENYPAVHANGIQSQ 108  chicken
EDL36781      122 RENYSSVDANGIQSQ 136  house mouse
Q26423        462 YSDFLGSDLNGIKSE 476  Southeast Asian horseshoe crab
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