2OQ6,3OPT,3KV9,2XXZ,3LD8


Conserved Protein Domain Family
JmjC

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smart00558: JmjC 
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A domain family that is part of the cupin metalloenzyme superfamily.
Probable enzymes, but of unknown functions, that regulate chromatin reorganisation processes (Clissold and Ponting, in press).
Statistics
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PSSM-Id: 214721
Aligned: 70 rows
Threshold Bit Score: 29.1424
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OQ6_A        168 DEWNIGRLrtilDLVEKES---GItIEGVNT------------------------PYLYFGMWKTSFAWHTEDMDlysIN 220  human
ZP_08148803   105 LWNKFGFIp--qWQRDDI-------------------------------------MVSYAPK-GGSVGKHYDEYD----V 140  Haemophilus p...
NP_274785      99 VYNHINNEpfsdHIARQVarfaGA-HTIVSG------------------------YLAFGSD--ESYKNHWDPRD----V 147  Neisseria men...
ZP_07589745    96 LMRPFRELp--dWRIDDL-------------------------------------MISFSVP-GGGVGPHLDQYD----V 131  Escherichia c...
NP_391867     100 FDFTDLFIpqvrRWIEKLKa-eLR-LPAGTSs----------------------kAIVYAAKNGGGFKAHFDAYT----N 151  Bacillus subt...
NP_588188     247 KLAYYVRKp---NIVRDLDl--VN-TVWPPGsfalge-------------yphvdTYCLMSAENSYTEFHIEFGGs--SA 305  Schizosacchar...
EGA75228       56 ELERPTAVrq-nDLVDKIWs--FN-GHLEKVngekaeen---------dpkpkvtKYILMSVKDAYTDFHLDFAGt--SV 120  Saccharomyces...
NP_496520     228 ELKEMARPp---RFVQDISm--AK-RLWSDVtsksalsd---------dhrpkieQICAAAMANSYTDFHVDFGGt--SV 290  nematode
XP_002808042  485 KLEHLVKRp---TVVDLVDw--VD-NMWPQHlkekqteatna---iaemkypkvkKYCLMSVKGCFTDFHIDFGGt--SV 553  rhesus monkey
NP_500610     445 EMKEIAKPp---RFVQEISm--VN-RLWPDVsgaeyikllqreeylpedqrpkveQFCLAGMAGSYTDFHVDFGGs--SV 516  nematode
2OQ6_A        221 YLHFGEP 227  human
ZP_08148803   141 FLVQGYG 147  Haemophilus parainfluenzae ATCC 33392
NP_274785     148 YAIQLFG 154  Neisseria meningitidis MC58
ZP_07589745   132 FIIQGTG 138  Escherichia coli W
NP_391867     152 LIFQIQG 158  Bacillus subtilis subsp. subtilis str. 168
NP_588188     306 YYNILDG 312  Schizosaccharomyces pombe 972h-
EGA75228      121 YYNVISG 127  Saccharomyces cerevisiae AWRI796
NP_496520     291 YFHVFKG 297  nematode
XP_002808042  554 WYHVFRG 560  rhesus monkey
NP_500610     517 YYHILKG 523  nematode
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