2OQ6


Conserved Protein Domain Family
JmjN

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smart00545: JmjN 
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Small domain found in the jumonji family of transcription factors
To date, this domain always co-occurs with the JmjC domain (although the reverse is not true).
Statistics
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PSSM-Id: 128818
View PSSM: smart00545
Aligned: 19 rows
Threshold Bit Score: 60.3542
Threshold Setting Gi: 90103514
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                          10        20        30        40
                  ....*....|....*....|....*....|....*....|....*....
2OQ6_A         35 RIMT-FYPTMEEFRNFSRYIAYIES----Qg-AHRAGLAKVVPPKEWKP 77
gi 308153457   13 RIMT-FYPTMEEFRNFSRYIAYIES----Qg-AHRAGLAKVVPPKEWKP 55
gi 75216887    93 YYVY-LFPLYLHIEDTLSYISSLRDr------AEPYGICCVVPPPSWKP 134
gi 61252601   556 EIPV-LRPSAKEFHDPLIYIESVRAq------VEKFGMCRVIPPPDWRP 597
gi 74638864    59 VAPV-FYPDKEEFQDSIGYINKIAPi------GEKYGIIKIVPPAGWNP 100
gi 74582975    33 GIPV-VEPKISEFVDMESFIRRVERl------GKKYGAIKVVRPSSVLN 74
gi 51315832    11 GVPV-FKPSMMEFANFQYFIDEITKf------GIENGIVKVIPPKEWLE 52
gi 90103514    80 EINVrVTPKKEEFSRGLDFISDLYD----Qt-ARKSGAVRVIPPDNWKC 123
gi 9937325    223 EAPT-FYPSPEEFSDPMKYIAWIADpqggN--GKAYGIVKIVPPQGWNP 268
gi 161784308   86 EVLT-FYPTMREFKNFSQYIKKIEQ----NggHLKAGIAKIVAPEGWTP 129
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