Conserved Protein Domain Family
NIDO

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smart00539: NIDO 
Extracellular domain of unknown function in nidogen (entactin) and hypothetical proteins.
Statistics
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PSSM-Id: 214712
Aligned: 16 rows
Threshold Bit Score: 119.839
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O88322     108 PFLADIDt---sHSRGRILYREd--T-SGAV-----LSLAARYVRTGFPLSGs---------SFTPTHAFLATWEHVGAY 167  house mouse
AAF58809   107 AFYSNVDtsfsdEGTSISLFES---K-EQSI-----LDRASSLVRYAFSSQS----------EFEARQVIVATWRNVGYF 167  fruit fly
AAF57124   244 IYPSDIDq-----RTPGVYFRV---E-RDLM-----GRTDRFGVEVRERTMWdirqgvvgadTFIPKHVVIATWKNVSFA 309  Drosophila melan...
Q17494      43 VFWQPAT-------LGNVWYREt--S-DINI-----MNLAHNEVNIQYRYGA----------QFRVRSVVLITWEGVKDP 97   Caenorhabditis e...
Q17494     637 IFALHAQfd--yIREGLVAYTFindT-DAVT-----LPLLMRSSIGIQTAMGi--------eNFQTKRLHIFTFDRVRQS 700  Caenorhabditis e...
NP_499205  286 IYGKRKKr----QMPGRVSQPGm--VvDPWL-----LDNITRHIQDGYTGAN----------GFRAEHAFIATWYRMAHG 344  nematode
ADI24643   146 PFWNRNDl----RNGGKVYYREv--T-KGRV-----LERGQSEIRYQYDKNV------------KVKSALIITWDKMQPL 201  nematode
NP_498181  454 MEWNLKK-------PLKIFGETt--E-KLTV-----TSTGLIAINEVNRDNGr---------LEDMQLVGIAPFFGPIDL 509  nematode
AAA85523   790 chsghsgvmlislAPGEPYFRTt--T-SHFTmsstsLIRKVESLINEFTSDW----------SFKP-SDTEVTWVNVPAY 855  Norway rat
NP_501890  216 FFGQQASqa--cPGTADSYVRCd-sN-SDYF-----LDQMMIWVQEGVAGGA----------MFRADAAVVVTWYNTASA 276  nematode
O88322     168 EEVSR----------GaapsgELNTFQAVLAS-----D--ESDTYAFFLYPANGLQFFGTRPKESynvqlQ----LPARV 226  house mouse
AAF58809   168 DSKTD----------R------LNTFQVALIA-----N--EQSTFVQFIYPDGGLNWLQGETAGLgl--pD----IRAQA 218  fruit fly
AAF57124   310 GGIdns-------------lyTTNTFQMVLAT-----D--EVYTYIIFNYAVLNWLSHTEAGGDTtkgegG----VPAYV 365  Drosophila melan...
Q17494      98 LVPe----------------sEGNTFQLALII-----G--DSMTFAHFIYSKln---------------fN----TNAIA 135  Caenorhabditis e...
Q17494     701 GSE------------------NFNSFQIVLAEs----D--KDATILSLIYE-------------------K----VQARG 733  Caenorhabditis e...
NP_499205  345 GAARAldvsqfehvkD-----WQNTFQVVLAS-----D--EIRTFAIFNYARLNWTSSNEAGGLD-----GfggkQAAMA 407  nematode
ADI24643   202 NTAAL----------Pe---eNTNTFQAAIFI-----T--ANGTFANFIYSNIGWT-------------------QGAEA 242  nematode
NP_498181  510 SRNGA----------K-----G-NTFQALLIDgsnskN--EKMTFVELMYRDLPWAS-------------------GAEA 552  nematode
AAA85523   856 PAQGRt---------L-----GANTYQAILST-----D--GSRSYALFLYQSGGMRWDVTQGLY-----------NRVLM 903  Norway rat
NP_501890  277 ISGRS----------Did-agQTGTYQVIWLT-----DstARLSYVIINYDRLGFDAQDFRGNSR-----S----GRCRA 331  nematode
O88322     227 GFCRGEADdlkreaLYFS------LTNTEQFVKNLYQLSNL--GIPGVWAFHIGSRFA 276  house mouse
AAF58809   219 GFVAEDGr------FYTL------NGSGSENARFLSESTNL--GVPGVWLFEVAPIEN 262  fruit fly
AAF57124   366 GFNAGNGTq-----------------AYEYNPYSQNMVIRD--LANRGWANGFPGRHI 404  Drosophila melanogaster
Q17494     136 GFSTRDS-------SYSL------PDSATNDAILLSEKSDI--GIPGEWLFRVDGDRI 178  Caenorhabditis elegans
Q17494     734 PMTGIST----------P------SRFLMLPNNRLASGSNV--GQPGKWMYRVDIADL 773  Caenorhabditis elegans
NP_499205  408 GFNGGNGTg-----wYGL------PYSGEGRLWKLGYFSNV--LTPGRWIHRVDEVII 452  nematode
ADI24643   243 GFNAGDATn-----HFKL------PTSGTPNIMYLEEYGNT--GIPGEWMFELSELRV 287  nematode
NP_498181  553 GILSSDASs-----SILL------PASGTEAISQLSKNSNI--KQPGTWLYRIDKAQL 597  nematode
AAA85523   904 GFSSGDGYf----eNSPLifrpavEKYRPDRFLTPNYGSGD--SRSTGYTGRCGPTTg 955  Norway rat
NP_501890  332 VFNGGNHTgt---vEVDP------TQPYKNTPKVLAQRSGVphMVRGRYMFRVDDVVR 380  nematode
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