2OWO,1V9P


Conserved Protein Domain Family
LIGANc

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smart00532: LIGANc 
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Ligase N family
Statistics
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PSSM-Id: 214709
Aligned: 36 rows
Threshold Bit Score: 388.136
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2OWO_A         4 IEQQLTELRTTLRHHEYLYHVMDAPEIPDAEYDRLMRELRELETKHPELITPDSPTQRVGAAPLAAFSQIRHEVPMLSLD 83  Escherichia col...
NP_110045      3 KVAQIRAIVEQLKRYDYHYYVLDDPLVSDFEYDQLYKQLQALEQAHPELIQPDSPTQRVGGIVVEAFNKFPHQNPMLSLD 82  Mycoplasma pneu...
ZP_02554435    4 IKAKIDELKQKLDQWNYEYYVLDDPSVPDHVYDQTMRELIELENNYPQFKTNNSPSVKVGGFVSEKFNKVKHKRPMLSLS 83  Ureaplasma parv...
NP_223276      4 SQKEYLERIEYLNTLSHHYYNLDEPIVSDAVYDELYQELKAYEEENPNRIQANSPTQKVGATATNEFSKNPHLMRMWSLD 83  Helicobacter py...
NP_072919      4 VKLKIQQLVNLIKNYDYHYYVLSEPLIDDFEYDMLYKSLQQLEKDHPDLIQIDSPTQRVGGEAVKGFKKLNHNSPMLSLE 83  Mycoplasma geni...
NP_207410      4 SQKEYLERIAYLNTLSHHYYNLDEPIVSDAIYDELYQELKAYEEKNPNGIQANSPTQKVGATTTNSFNKNPHLMRMWSLD 83  Helicobacter py...
ZP_01067996    2 KKEEYLEKVALANLWMRAYYEKDEPLASDEEYDALIRELRVFEEQNKDEISKDSPTQKIAPTIQSEFKKIAHLKRMWSME 81  Campylobacter j...
NP_212686      5 VQQEIADLKKLIRKWDKEYYVDSLPSVEDFVYDKHILRLQELESKYPEYKTLDSPTLKFGSDLLNDFKEVEHSAPILSLD 84  Borrelia burgdo...
YP_004673358   4 AQRRVQELEKLILHHQDRYYN-AEPDISDDAFDALWEELARLDPGNPLLKAIGSDSQRDAVKK-------RHIVPMGSQH 75  Treponema paral...
ZP_03067756   32 AQEEISRLQQQIKQWDDDYWKEGKSEVEDGVYDQLSARLTQWQRCF------GSEPRDVMMPPLNG--AVMHPVAHTGVR 103 Escherichia col...
2OWO_A        84 NVFDEESFLAFNKRVQDRLknNEKVTWCCELKLDGLAVSILYENGVLVSAATRGDGTTGEDITSNVRTIRAIPLKLHGEn 163 Escherichia col...
NP_110045     83 NAFDTATIASFIANINNLT--GVQNRFVVEPKIDGVSISLTYENGLLTRALTRGDGLVGEDVLSNVKTIKSIPLTIP--- 157 Mycoplasma pneu...
ZP_02554435   84 NAFNDDDLKKFDQDNQNAS--VDLKGYVVEPKIDGLSISIIYKNAKLHQAITRGDGINGEDVTSNILTIKDIPHYIDQK- 160 Ureaplasma parv...
NP_223276     84 DVFNQNELRAWLQRILK-V--YPNASFVCSPKLDGVSLNLLYQHGKLISATTRGNGLEGELVTNNAKHIANIPHSIA--- 157 Helicobacter py...
NP_072919     84 NAFSTKEIANFIDNINFQT--NSKNEFVVEPKIDGVSISLTYKNGVLVHALTRGDGSVGEDVLNNVKTIKSIPLTIP--- 158 Mycoplasma geni...
NP_207410     84 DVFNQSELQAWLQRILKAY--PS-ASFVCSPKLDGVSLNLLYQHGKLVKATTRGNGLEGELVSANAKHIANIPHAIA--- 157 Helicobacter py...
ZP_01067996   82 DVFDESELRAWAKR----A--KCEKNFFIEPKFDGASLNLLYENGKLVSGATRGDGEVGEDITLNVFEIENIPKNIA--- 152 Campylobacter j...
NP_212686     85 KVYDLDLLKSWIDKIDF----NNSFNISVEPKIDGCSIVLYYKDGVLEKALTRGNGKFGNDVTINVRTIRYIPLFLDEK- 159 Borrelia burgdo...
YP_004673358  76 KAADEESFSAWAKKNALQ-------AFLVQHKLDGVSLELQYERGHFCCALTRGNGIVGDDVTANVRGMRGFVPTLTAEw 148 Treponema paral...
ZP_03067756  104 KMVDKNALSLWMRERSDL---------WVQPKVDGVAVTLVYRDGKLNKAISRGNGLKGEDWTQKVSLISAVPQTVSGP- 173 Escherichia col...
2OWO_A       164 -Ip-aRLEVRGEVFLPQAGFEKINEDARRTGGKVFANPRNAAAGSLRQLDPRITAKRPLTFFCYGVGVLEGGEl----PD 237 Escherichia col...
NP_110045    158 -Fh-kQVEIRGEIFVDKKTFAQINENLA----KPFANARNLAAGTLRNLNSEVSAKRKLKAFFYFVPNALTLGc-----R 226 Mycoplasma pneu...
ZP_02554435  161 -YkdyEIEVRGEVYMAFHDFYEMNDNLEESDKK-FANPRNAAAGTLRSLDNSIVAERKLSAFMYYLVNAQELGi-----K 233 Ureaplasma parv...
NP_223276    158 -Yn-gEIEIRGEVIISKEDFDALNKERLNANEPLFANPRNAASGSLRQLDSNITKKRKLQFIPWGVGKHSLHFl----R- 230 Helicobacter py...
NP_072919    159 -Ft-kTIEIRGEIFVDKKTFLAINNQLE----KPFANARNLAAGTIRNLNSEITAQRKLRALFYYIPNGLEESi-----T 227 Mycoplasma geni...
NP_207410    158 -Yn-gEIEIRGEVIISKKDFDALNQERLNANEPLFANPRNAASGSLRQLDSEITKKRKLQFIPWGVGKHSLNFl------ 229 Helicobacter py...
ZP_01067996  153 -Yk-eRIEIRGEVVILKDDFEKINEKRALLNQSLFANPRNAASGSLRQLDTSITKERNLKFYPWGVGENTLNFt----K- 225 Campylobacter j...
NP_212686    160 -V---DLVLRGEVYITKENFLKINKFLE----KPYTNSRNLASGILRRVDSREVANFPLNIFIYDFLNAGLEF------K 225 Borrelia burgdo...
YP_004673358 149 gPc-gNLPFTGGVRGEVIMHKDIHRSHY----PTHANCRNTVNGILKRKDGRGRTHLHIVCYDAVPGTPGKPFtgslpFA 223 Treponema paral...
ZP_03067756  174 -La--NSTLQGEIFLQREG----HIQQQMGG----INARAKVAGLMMRQDDSDTLN-SLGVFVWAWPDGPQL-------- 233 Escherichia col...
2OWO_A       238 THLGRLLQFKKWGLP-VSDRVTLCE---SAEEVLAFYHKVEEDRPTLGFDIDGVVIKVNSLAQQEQLGFVARAPRWAVAF 313 Escherichia col...
NP_110045    227 SQSAVLAQLKQWNFP-VSKAVASFD---RPEALIEYLEQFDQTRDQLNFQVDGLVVKLDNFHFYDQLGFTSKFPRWALAY 302 Mycoplasma pneu...
ZP_02554435  234 THYESIQFLRDNKFK-VSDLIVKVD---TINEVINQIDCYTKVRDKLSYMIDGIVIKINNLEVYDEIGYTSKFPKWAIAY 309 Ureaplasma parv...
NP_223276    231 -FKECLDFIVSLGFS-AIQYLSLNK---NHQEIEENYHTLIREREGFFALLDGMVIVVDELDIQKELGYTQKSPKFACAY 305 Helicobacter py...
NP_072919    228 TQTMVLEQLKQWKFP-VSDTIRVFQ---NKFQLINYLEAFDKKREQLTFNLDGLVIKLNSLLFYQQLGATSKSPRWAIAF 303 Mycoplasma geni...
NP_207410    230 SFKECLDFIVSLGFS-AIQYLSLNK---NHQEIEDNYHTLIREREGFFALLDGMVIVVNELNIQKELGYTQKSPKFACAY 305 Helicobacter py...
ZP_01067996  226 -HSEVMQFIRELGFL-KDDFVRLCA---NLDEVLKAYDELLALREKKPMMMDGMVVRVDDLALCEELGYTVKFPKFMAAF 300 Campylobacter j...
NP_212686    226 TNDLATARLKKLGFK-VNPLIRFFDlknSIGEVLNYIADITKKRDSFEYEIDGVVLKVSDFALRERLGYTAHHPKWAMAY 304 Borrelia burgdo...
YP_004673358 224 DETEKLAWLARQGF--VTVHSHRCA---NAQEVVALRSEIMRTRELLPYSIDGLVVKSTDLDFQD--AQLPR-PKKQIAF 295 Treponema paral...
ZP_03067756  234 -MSDRLKELATAGFTlTQTYTRAVK---NADEVARVRNEWWK--AELPFVTDGVVVRAAKEPESR--HWLPGQAEWLVAW 305 Escherichia col...
2OWO_A       314 KFPAQEQMTFVRDVEFQVGRTGAITPVARLEPVHVAGVLVSNATLHNADEIERLGLRIGDKVVIRRAGDVIPQVVNVVLS 393 Escherichia col...
NP_110045    303 KFKPKFVQTKLRGVLVTVGRTGKINYTAQLDPVNLEGTVVSAATLHNFDYIKEKDIRLNDTVIIYKAGEIIPKVLEVCLP 382 Mycoplasma pneu...
ZP_02554435  310 KFPANVVSSQLLEIINDVGRTGKISYVAKIKPILLDGSMVEYATLHNFDFIKEKDIRINDEIKIYKAGDVIPYVDGVDLS 389 Ureaplasma parv...
NP_223276    306 KFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMVNRATLHNYSEIEKKNIMLNDRVVVIRSGDVIPKIIKPLES 385 Helicobacter py...
NP_072919    304 KFSPKFVQTKLTAVLITIGRTGRVNYTAKLESVNLDGTKVTAATLHNFDYIKTKDIRINDTVVIYKAGEIIPKVLKVNLE 383 Mycoplasma geni...
NP_207410    306 KFPALEKHTKIVGVINQVGRSGAITPVALLEPVEIAGAMINRATLHNYSEIEKKNIMLSDRVVVIRSGDVIPKIIKPLES 385 Helicobacter py...
ZP_01067996  301 KFPALEKTTRLIGVNLQVGRSGVITPVAVLEPVNLDGVVVKSATLHNFDEIARLDVKINDFVSVIRSGDVIPKITKVFKE 380 Campylobacter j...
NP_212686    305 KFEALSGFSRVNSIVVQVGRSGKITPVANIDKVFVSGAFITSATLHNQDYIRSIGLNVGDVVKVSRRGDVIPAVEMVINK 384 Borrelia burgdo...
YP_004673358 296 KFSTQEAITTLRDVQWQTSG-VTYTPIGITDPVRLAGTTVKRANLCNPNMLTKLCLKIGSHVLISKRGEIIPKIEALVS- 373 Treponema paral...
ZP_03067756  306 KYQPVAQVAEVKAIQFAVGKSGKISVVASLAPVMLDDKKVQRVNIGSVRRWQEWDIAPGDQILVSLAGQGIPRIDDVVWR 385 Escherichia col...
2OWO_A       394 ERPEDTREVVFPTHCPVCGSDVERVEGEAVARCTGG--LiCGAQRKESLKHFVSRRA 448 Escherichia coli ATCC 8739
NP_110045    383 LRTAANQPIPEQTHCPACQAPLVQYKDEVDQYCTNE--R-CDQRNLEAINYFVSKTA 436 Mycoplasma pneumoniae M129
ZP_02554435  390 KRLANSVPYEPIINCPSCQSVLVRENDEVDQRCLNIy-G-CKKINIEKIVYFVSRNC 444 Ureaplasma parvum serovar 6 str. ATCC ...
NP_223276    386 YRDGSQQKIMRPKVCPICSHELLCE--EIFTYCQNL--N-CPARLKESLIHFASKDA 437 Helicobacter pylori J99
NP_072919    384 KRKNDTIIIQEQKYCPSCNSKLVKIVDEVDQYCTNE--T-CKERNIQLINYFVSKTA 437 Mycoplasma genitalium G37
NP_207410    386 YRDGSQHKIERPKVCPICSHELLCE--EIFTYCQNL--N-CPARLKESLIHFASKDA 437 Helicobacter pylori 26695
ZP_01067996  381 RREGLEMEISRPKLCPTCQSELLDEG--TLIKCQNI--D-CEDRLVNSIIHFVSKKC 432 Campylobacter jejuni subsp. jejuni CF93-6
NP_212686    385 FSTG---FFKVPDNCPACKTAVVKEG--AHFFCPNN--N-CPSVAVERIKYFCSKNC 433 Borrelia burgdorferi B31
YP_004673358 374 -TPAHAQEIHIPTQCTSCNTVLENSG--SRLFCPNV--N-CPLLSHHRITRWIECLe 424 Treponema paraluiscuniculi Cuniculi A
ZP_03067756  386 G-----AERTKPTPPENRFNSLT---------CYFAsdV-CQEQFISRLVWLGAKQV 427 Escherichia coli 101-1
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