Conserved Protein Domain Family
HMG17

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smart00527: HMG17 
domain in high mobilty group proteins HMG14 and HMG 17
Statistics
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PSSM-Id: 197773
Aligned: 9 rows
Threshold Bit Score: 34.1519
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
NP_001165279   2 PKRKqVNADVADA-----KDEPKRRSARLSSKPTPAKTEPKPKKekAPVKEKPEEke----kkVPAKGKKGAKGK--QTE 70  African clawed ...
NP_001029944   2 PKRK-VSSAEGAA-----KEEPKRRSARLSAKPAPAKVETKPKK--AAGKDKSSDk------kVQTKGKRGAKGK--QAE 65  cattle
XP_850784    153 PKRK-AEGDAKGDka-kvKDKPQRRSARLSAKPAPPKPEPKPKK--APARK-------------GEKVPKGKRGK----A 211 dog
NP_001081730   2 PKRKaDGDSKAEKak--aKDEPQRRSARLSAKPAPPKPEAKPKK--AAAPPKK-----------ADKAPKGKKGK----A 62  African clawed ...
AAF30179       2 PKRK--AAGDVSQ-------EPKRRSARLSAMPVPFTPELKPKRasTSRKTKTTN--------VVEENKDASTIPipETK 64  house mouse
P02315         2 PKRK--SATKGD--------EPARRSARLSARP-VPKPAAKPKK--------------------AAAPKKAVKGK----- 45  rainbow trout
AAA73877      23 PKRKsPENTEGKDgskvtKQEPTRRSARLSAKPAPPKPEPKPRK--TSAKKEP-----------GAKISRGAKGKkeEKQ 89  human
P12902         2 PKRKaPAEGEAKE-------EPKRRSARLSAKPAPPKPEPKPKK--AAPKKEKAAndkkedkkAATKGKKGAKGKdeTKQ 72  chicken
NP_990437      2 PKRK-VAASRGGR-----EEVPKRRSARLSAKPVPDKAEPKAKA--LAAKDKSENk------kAQSKGKKGPKGK--QTE 65  chicken
NP_001165279  71 EANKE--EaneDQPSENGETKSDEAPASDGG 99  African clawed frog
NP_001029944  66 VANQEtkE---DLPAENGETKNEESPASDEA 93  cattle
XP_850784    212 DAGKD--E---NNPAENGEAKTDQAQKAEGA 237 dog
NP_001081730  63 DSGKD--S---SNAAENGEAKSDQAQKAETG 88  African clawed frog
AAF30179      65 PEDVK--DecnVENAENGEAKIMEAPIPKME 93  house mouse
P02315        46 ------------KAAENGDAKAEAKVQAAGD 64  rainbow trout
AAA73877      90 EAGKE--G---TAPSENGETKAEEAQKTESV 115 human
P12902        73 EDAKE------ENHSENGDTKTNEAPAAEAS 97  chicken
NP_990437     66 ETNQE--QikdNLPAENGETKSEETPASDAA 94  chicken
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