1DD9,2V1C,2AU3,1NUI


Conserved Protein Domain Family
TOPRIM

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smart00493: TOPRIM 
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topoisomerases, DnaG-type primases, OLD family nucleases and RecR proteins
Statistics
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PSSM-Id: 214695
Aligned: 125 rows
Threshold Bit Score: 31.8477
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1DD9_A      164 NRLLVVEGYMDVVALAQYGI-------------------N--YAVASLGTS----------------------------- 193 Escherichia coli
Q60215        4 ERLVIAEKPELAKAIVEGLGggsrkd-------gyyecgSd-RVTWCYGHMlalldpedyderyanwnm------adlpi 69  Plasmid RP4
P96583        3 KTVVLAEKPSVGRDLARVLKchkkgn--------gylegDqyIVTWALGHLvtladpegygkefqswr--------ledl 66  Bacillus subtilis
YP_133942     1 MRLFIAEKPSVAKAIAGELGatgkgd--------gfiecGtdKVTWCFGHMleqadpdeytpddvprgqsgkkvwrvdel 72  Plasmid pB3
NP_652966    10 KTLFIAEKPKVANEIMKSPRfrhsqkyigskpyygyyenDhyIVSWCRGHLlelknpeemdpkyklfq---------leh 80  Bacillus anthrac...
ACZ68703      2 NTLILCEKPSQAMDLSTVFAkkkkqngym--eisdeqlnVsgFLTWAVGHLvelkepqeydekyknfs--------typi 71  Staphylococcus a...
ZP_01784614   1 MRLFIAEKPSLARAIADVLPkphqrgd------gfikcgDndVVTWCVGHLleqaepdaydpkfkqwrl--------ehl 66  Haemophilus infl...
EFY16672      1 MRLFIAEKPSLGRAIADVLPkphrkgd------gfiecgNgqVVTWCIGHLleqaqpdaydsryarwn--------ladl 66  Salmonella enter...
NP_047305     2 KTIVLAEKPSQASDYANAFQkhtkkqgyf--evsdpvlaNetFITYGFGHLvelaspeqydtkykkwd--------lknl 71  Lactococcus lactis
YP_783893     2 STVILAEKPSQALAYAQAFNqsdkkdgyf--eikdplftDetFITFGFGHLvelaepghydekwqnwk--------lesl 71  Enterococcus fae...
1DD9_A      194 -------------TTADHIQLLFRATNN-----VICCYDGDRAGRDAAWRALETALPYM 234 Escherichia coli
Q60215       70 vhipwrkkpsgdaGAKAQFKTILSLLKQak--sVVHAGDPDDEGQLLVDEILEYANCRL 126 Plasmid RP4
P96583       67 piipeplklvvikKTGKQFNAVKSQLTRkdvnqIVIATDAGREGELVARWIIEKANVRK 125 Bacillus subtilis
YP_133942    73 piipeswilkpkdDAKKQLAVIGKLLKEak--eIVNAGDPDREGQLLVDEVLEHFRNSK 129 Plasmid pB3
NP_652966    81 lplifqpsykviqENAEQLQILVKLLQRpdvdhAVNICDADREGELIYREVYEYAGVNK 139 Bacillus anthracis str. A2012
ACZ68703     72 llekddfqfkvsdKTKDQFNNIKKIFKEnkideVIIATDPAREGENIAYKILNQLKVTD 130 Staphylococcus aureus
ZP_01784614  67 piipekwqllprkevKKQLSVVEKLIHQad--tLVNAGDPDREGQLLVDEVFSYANLAT 123 Haemophilus influenzae 22.1-21
EFY16672     67 pivpekwqlqprpSVTKQLNVIKRFLHQag--eIIHAGDPDREGQLLVDEVLDYLQLpa 123 Salmonella enterica subsp. enterica s...
NP_047305    72 pifpekykfivpkDKKGQFSIVSDLIKDad--qIIIATDSDREGENIAWSILNKAKIDL 128 Lactococcus lactis
YP_783893    72 pifpdrydfevakDKGKQFKIVAELLKKan--tIIVATDSDREGENIAWSIIHKANAFS 128 Enterococcus faecalis
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