1T7P,1BGX,1DPI,2XO7,3IKM


Conserved Protein Domain Family
POLAc

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smart00482: POLAc 
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DNA polymerase A domain
Statistics
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PSSM-Id: 214687
Aligned: 42 rows
Threshold Bit Score: 160.868
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1T7P_A     442 GEQCRAAFGAE-HHldgitgkpWVQAGIDASGLELRCLAHFMArfD-------------NGEYAHEILNG---DIHTKnq 504  T7
NP_046860  376 DWTVRRCFLAD-PG--------HVMASIDYQAQELRVLAALSG--D-------------RTMIQAFKDGA---DLHLM-- 426  Mycobacterium ph...
ADP90884   871 GSELKAMVQAP-PG--------YTLVGADVDSQELWIAAVLGD--AhfagmhgctafgwMTLQGRKSRGT---DLHSK-- 934  human
Q01941     644 GSELKSLIEAP-KG--------YCFVGADVDSEELWIASLIGD--Svfkihg-gtaigwMTLEGTKNEGT---DLHSK-- 706  Pichia pastoris
EEU07533   674 GSELKTQVKAP-PG--------YCFVGADVDSEELWIASLVGD--Sifnvhg-gtaigwMCLEGTKNEGT---DLHTK-- 736  Saccharomyces ce...
Q92076     283 GSELKAMVQVP-PG--------YSLVGADVDSQELWIAAVLGE--AhfagmhgctafgwMTLQGKKSDGT---DLHSK-- 346  chicken
XP_957747  721 GSELKAMVRAP-PG--------YVFVGADVDSEELWIASVVGD--Atfklhg-gnaigfMTLEGTKSQGT---DLHSR-- 783  Neurospora crass...
AAC47658   789 GSELRSMVQAP-PG--------YRLVGADVDSQELWIASVLGD--AyacgehgatplgwMTLSGSKSNGS---DMHSI-- 852  fruit fly
NP_047956  383 DWMIRRAIVGDaPD--------HIMGSVDFQAIEMRVLAALAD--V-------------KRMKDGFVNGGsdfDIHMY-- 437  Streptomyces pha...
NP_039708  372 DWIVRRCFIAE-PG--------DVMASVDYQAQELRVLAALSG--D-------------RNMIEAFENGA---DLHQM-- 422  Mycobacterium ph...
1T7P_A     505 Ia-AEL----------PTRDNAKTFIYGFLYGAG---DE---KIGQIVG--AGKERGKELKKKFLENTPA---------- 555  T7
NP_046860  427 Ta-RAAfgdhitkddpE-RKYAKTVNFGRVYGGG---AN---TVAEQTG--ISIETAKQVVDGFDKAYPG---------- 486  Mycobacterium ph...
ADP90884   935 Ta-TTVg---------ISREHAKIFNYGRIYGAGqpfAE---RLLMQFNhrLTQQEAAEKAQQMYAATKGlrwyrlsdeg 1001 human
Q01941     707 Ta--KIl--------gISRNEAKIFNYGRIYGAG---IKfttTLLKKFNpaLSDAEAKATANALYTATKG---------- 763  Pichia pastoris
EEU07533   737 Ta--QIl--------gCSRNEAKIFNYGRIYGAG---AKfasQLLKRFNpsLTDEETKKIANKLYENTKG---------- 793  Saccharomyces ce...
Q92076     347 Ta-ATVg---------ISREHAKVFNYGRIYGAGqpfAE---RLLMQFNhrLTQQQAREKAQQMYAVTKG---------- 403  chicken
XP_957747  784 Ta-S-Il--------gITRNDAKVFNYGRIYGAGlkfAS---QLLRQFNpsLTEAETTAIATKLYDATKG---------- 840  Neurospora crass...
AAC47658   853 Ta-KAVg---------ISRDHAKVINYARIYGAGqlfAE---TLLRQFNptFSASEAKAKAMKMFSITKG---------- 909  fruit fly
NP_047956  438 Ta-QLIkgle---atkRDRKVFKGAGFGKVYGGG---VA---TIARQTG--ATEAEIARAVAEYDRVFPE---------- 495  Streptomyces pha...
NP_039708  423 TadAAQv----------pRKVGKTANFQKVYGGG---AK---ALAEAVGisIPVAKRVHEAFSATYPG------------ 474  Mycobacterium ph...
1T7P_A     556 --------------------------------IA-ALre----------------------------------sIQQ--- 565  T7
NP_046860  487 --------------------------------VT-RY-------------------------------------SRK--- 493  Mycobacterium ph...
ADP90884  1002 ewlvrelnlpvdrteggwislqdlrkvqretaRK-SQ-------------------------------------WKK--- 1040 human
Q01941     764 --------------------------------ISgRY-------------------------------------DKK--- 771  Pichia pastoris
EEU07533   794 --------------------------------KT-K--------------------------------------RSK--- 799  Saccharomyces ce...
Q92076     404 --------------------------------IR-RFhlseegewlvkelelavdkaedgtvsaqdvqkiqreaMRKsrr 450  chicken
XP_957747  841 --------------------------------AK-TN-------------------------------------RKS--- 847  Neurospora crass...
AAC47658   910 --------------------------------KR-VYrlreefhdeledr-----------ayssyeasrlaiqRNR--- 942  fruit fly
NP_047956  496 --------------------------------IK-RA-------------------------------------SSR--- 502  Streptomyces pha...
NP_039708  475 --------------------------------VE-RL-------------------------------------SKK--- 481  Mycobacterium ph...
1T7P_A     566 ------T---LVES-----SQWVAgEQ-QVKWKRRWIKGL-D-G-RKVHVR------------------SPHa------- 602  T7
NP_046860  494 ------L---ANEA-----KRNGY-II-NPMGRRLPVDRS-----------------------------RTYs------- 521  Mycobacterium ph...
ADP90884  1041 ------WevvAERA-----WKGGT-ES-EMFNKLESIATS-DiP-RTPVLGccisralep-savqeefmTSR-------- 1096 human
Q01941     772 ------S------I-----WYGGS-ES-IIFNRLEAIAEMaH-P-KTPVLGagitaplqkanlstnnflTSR-------- 822  Pichia pastoris
EEU07533   800 ------L---FKKF-----WYGGS-ES-ILFNKLESIAEQ-EtP-KTPVLGcgityslmkknlransflPSR-------- 853  Saccharomyces ce...
Q92076     451 kkkwdvV---AHRM-----WAGGT-ES-EMFNKLESIALS-A-SpQTPVLGc----------------hISRalepavak 502  chicken
XP_957747  848 ------Ly--KRPF-----WRGGT-ES-FVFNMLEEFAEQeR-P-RTPVLGagitealmsrwvskggflTSR-------- 902  Neurospora crass...
AAC47658   943 ------T---LAEVfhrpnWQGGT-ES-AMFNRLEEIATG-SqP-RTPFLGg----------------rLSRaleadtgp 993  fruit fly
NP_047956  503 ------W---QREA-----RGTGL-VTvSVTGRRLPLDRN-----------------------------RTYa------- 531  Streptomyces pha...
NP_039708  482 ------L---AMEA-----GRNGY-IV-NAMGRRLPVDSS-----------------------------RTYs------- 509  Mycobacterium ph...
1T7P_A     603 ---------aLNTLLQSAGALICKLWIIKTEEMLVEKGLkhgwDGDFAYMawVHDEIQVGCRTEE 658  T7
NP_046860  522 ---------aLNYQIQSTSRDVTCKALIRLHEAGFTPYL----R----LP--IHDEIVASLPAEK 567  Mycobacterium phage D29
ADP90884  1097 ----------VNWVVQSSAVDYLHLMLVAMKWLFEEFAI----DGRFCIS--IHDEVRYLVREED 1145 human
Q01941     823 ----------INWAIQSSGVDYLHLLIISMDYLIKLFDI----DARLCIT--VHDEIRYLVKEED 871  Pichia pastoris
EEU07533   854 ----------INWAIQSSGVDYLHLLCCSMEYIIKKYNL----EARLCIS--IHDEIRFLVSEKD 902  Saccharomyces cerevisiae JAY291
Q92076     503 ---gefltsrVNWVVQSSAVDYLHLMLVSMKWLFEEYDI----NGRFCIS--IHDEVRYLVQEQD 558  chicken
XP_957747  903 ----------INWAIQSSGVDYLHLLIIAMDYLTRRFNL----ACRLAIT--VHDEIRYLAEEPD 951  Neurospora crassa OR74A
AAC47658   994 eqeqrflptrINWVVQSGAVDFLHLMLVSMRWLMGSH-------VRFCLS--FHDELRYLVKEEl 1049 fruit fly
NP_047956  532 ---------vVNYQCQSAARDVLGQAMLNMRDAGLLDY--------MKLP--IHDEIVFSAPKAD 577  Streptomyces phage phiC31
NP_039708  510 ---------aLNYMIQSSSRDVTCRALIRLHEAGYTPY--------LRLP--IHDEIVASLPASE 555  Mycobacterium phage L5
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