2HPI,2HNH,1M65


Conserved Protein Domain Family
POLIIIAc

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smart00481: POLIIIAc 
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DNA polymerase alpha chain like domain
DNA polymerase alpha chain like domain, incl. family of hypothetical proteins
Statistics
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PSSM-Id: 197753
Aligned: 74 rows
Threshold Bit Score: 40.3274
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2HPI_A       9 HLHQHTQFSllDGAAKLQDLLKWVKETtpEDPALAMTDHg------nLFGAV-EFYKKATA-----------MGVKPIIG 70   Thermus aquaticus
O29035       3 DLHIHSNYS--DGQGSVEEIARRAKER--GLKAIAIVDHsi----elPFGLT-EKKARMREieien--aaslYGIKIYSG 71   Archaeoglobus fu...
O29745       5 ELHVHSSFS--DGRDGVRKILEAAVEK--KLEVIAITDHd------tVQGSL-EAIDIVKEe---------hLPLKVLPG 64   Archaeoglobus fu...
O67416     345 DLHMHTNWS--DGVNTLEEMVETAYKL--GYQYIVIGDHsqs--arvANGLDpERYKQQWKeidrlnkeynpKGFYILKG 418  Aquifex aeolicus
P96221      99 DLHLHSNWS--DGSAPIEEMMATAAAL--GHQYCALTDHsprltianGLSPD-RLRKQLDVidel---rekfAPLRILTG 170  Mycobacterium tu...
O27522       5 DPHIHSVYSg-DARGTPREILRRASAV--GLDAVAVADHn------tMKGSI-IALKESRG-----------MGITVVPA 63   Methanothermobac...
O26650     337 DLHMHSLFS--DGIDSMEQMAEYASVL--GREYIAITDHa------rYIDDP-DAYFRAAEr---------iEEIDVLAG 396  Methanothermobac...
P72464     100 DCHLHADWS--DGGSPMEEMGRTAAAL--GHEWAALTDHspr--ltvARGLS-PARLREQLdvvae-lnatwAPFRLLTG 171  Streptomyces liv...
Q55394      55 NFHLHTRCS--DGQMTPEGLIEQAIHQ--ELQGLAITDHh------cVAGYY-RAQRWLTEhch-----ypsLRPQLWTG 118  Synechocystis sp...
NP_146951    4 ELHSHTTVS--DGFQTPMEIVKIAAKA--GLAAIAVTDHd------tFRGSS-LAKRAAKLl----------GGVAVIPA 62   Aeropyrum pernix K1
2HPI_A      71 YEAYVAA 77   Thermus aquaticus
O29035      72 IECSINA 78   Archaeoglobus fulgidus
O29745      65 CEVTAST 71   Archaeoglobus fulgidus
O67416     419 AEVDILP 425  Aquifex aeolicus
P96221     171 IEVDILE 177  Mycobacterium tuberculosis
O27522      64 MELSTSA 70   Methanothermobacter thermautotrophicus str. Delta H
O26650     397 VEVSILH 403  Methanothermobacter thermautotrophicus str. Delta H
P72464     172 IECDILD 178  Streptomyces lividans
Q55394     119 IEITANL 125  Synechocystis sp. PCC 6803
NP_146951   63 AEVRSEW 69   Aeropyrum pernix K1
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