1KEA,3OGD,1WEF,3N5N,1PU6,1FN7,2JHJ,3FHF


Conserved Protein Domain Family
ENDO3c

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smart00478: ENDO3c 
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endonuclease III
includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase DNA glycosidases (Alka-family) and other DNA glycosidases
Statistics
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PSSM-Id: 214684
Aligned: 64 rows
Threshold Bit Score: 64.5923
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1KEA_A     44 LLRRTTAGHVKKIYDKF--FVKYK---------------CFEDILKTPK-----SEIAKDIKE--IGLSNQRAEQLK--- 96  Methanothermobacte...
O31544    127 IHQQLNLSFAYTLTERF--VHAFGeqkdg-----vwcypKPETIAELDY---------QDLRD--LQFSMRKAEYTI--- 185 Bacillus subtilis
Q9ZBF2    325 LGQQVSTAAARTHAARL--VTAHGdpvddpegglthlfpSTEALAAVDP--------ETLAMP-----RTRRTTFTT--- 386 Streptomyces coeli...
NP_595869  50 TSQKLSDAATNSIINKFctQCSDNd--------------EFPTPKQIMEt-----DVETLHEC---GFSKLKSQEIH--- 104 Schizosaccharomyce...
NP_961377 326 LGQQVSIRAARTHAGRL--VAAYGra-----------vhDPEGTLTHTFp---sVQQLADVDPihLAVPKARQRTLA--- 386 Mycobacterium aviu...
NP_855004 246 LAQQVSTKAASTHAGRL--VAAYGr--------------PVHDRHGALThtfpsIEQLAEIDPghLAVPKARQRTIN--- 306 Mycobacterium bovi...
NP_388061 139 LGQQINLAFAYSLKKQF--VEAFGdsiewng-kkywvfpPYERIARLTP---------TDLAD--IKMTVKKSEYII--- 201 Bacillus subtilis ...
NP_011069  92 LSQQISGQAAESIKARV--VSLYGgafp-------dykiLFEDFKDPAK--------CAEIAK--CGLSKRKMIYLE--- 149 Saccharomyces cere...
NP_593991  59 ASQQLHSKAANAIFNRF--KSISNngq----------fpTPEEIRDMDF---------EIMRA--CGFSARKIDSLK--- 112 Schizosaccharomyce...
3OGD_A    137 MAAKLTARVAQLYGERLddFPEYIcf------------pTPQRLAAADP---------QALKA--LGMPLKRAEALIhla 193 Escherichia coli K12
1KEA_A     97 --ELA-RVVIN----DYGGRVP----------RNRKAILD-LPGVGKYTCAAVMCLAFGK--KAAMVDA---NFVR-VIN 152 Methanothermobacte...
O31544    186 --DTS-RMIAEg--tLSLSELPhma-----deDIMKKLIK-IRGIGPWTVQNVLMFGLGRpnLFPLADI---GLQN-AIK 250 Bacillus subtilis
Q9ZBF2    387 ---LV-AHLAD------GSVNPgves---dwaETRARLLA-LPGFGPWTADVIAMRALGDpdAFLPTDL---GIRR-AAA 448 Streptomyces coeli...
NP_595869 105 --IVAeAALNKqipsKSEIEKMs--------eEELMESLSkIKGVKRWTIEMYSIFTLGRl-DIMPADD---STLKnEAK 170 Schizosaccharomyce...
NP_961377 387 --ALVaGLADRs--iVLDTGCDw--------qSARTQLLA-LPGVGPWTAEVIAMRGLGDpdAFPAADLg----LRvAAK 449 Mycobacterium aviu...
NP_855004 307 --ALVaSLADKs--lVLDAGCDw--------qRARGQLLA-LPGVGPWTAEVIAMRGLGDpdAFPASDLg----LRlAAK 369 Mycobacterium bovi...
NP_388061 202 --GIA-RLMAS----GELSREKlmkm---nfkDAEKNLIK-IRGIGPWTANYVLMRCLRFptAFPIDDV---GLIH-SIK 266 Bacillus subtilis ...
NP_011069 150 --SLA-VYFTE----KYKDIEKlfgqk-dndeEVIESLVTnVKGIGPWSAKMFLISGLKRmdVFAPEDL---GIAR-GFS 217 Saccharomyces cere...
NP_593991 113 --SIA-EA-------TISGLIPtkeeaerlsnEELIERLTqIKGIGRWTVEMLLIFSLNRddVMPADDLsirNGYR-YLH 181 Schizosaccharomyce...
3OGD_A    194 naALE-GTLPM----TIPGDVE----------QAMKTLQT-FPGIGRWTANYFALRGWQAkdVFLPDD------YL-IKQ 250 Escherichia coli K12
1KEA_A    153 RYFGGsyeN---LNYnHKALWELAETLVPGGKCRDFNLG----LMDFSAI 195 Methanothermobacter thermautotrophicus
O31544    251 RHFQL---DdkpAKDvMLAMSKEWEPYLS-------YAS----LYLWRSI 286 Bacillus subtilis
Q9ZBF2    449 ELG---------LPStPAALTARAAAWRP---WRAYAVQ----YLWATDD 482 Streptomyces coelicolor
NP_595869 171 EFFGL---S---SKPqTEEVEKLTKPCKP---YRTIAAW----YLWQIPK 207 Schizosaccharomyces pombe 972h-
NP_961377 450 RLG---------LPSgQRSLTAASARWRP---WRSYATQ----YLWTTLE 483 Mycobacterium avium subsp. paratuberculosis K-10
NP_855004 370 KLG---------LPAqRRALTVHSARWRP---WRSYATQ----HLWTTLE 403 Mycobacterium bovis AF2122/97
NP_388061 267 ILRNM---N---RKPtKDEI---LEISVPWKEWQSYATF----YLWRVLY 303 Bacillus subtilis subsp. subtilis str. 168
NP_011069 218 KY----------LSD-KPELEKELMRERK-----VVKKS----KIKHKKY 247 Saccharomyces cerevisiae S288c
NP_593991 182 RLp---------KIPtKMYVLKHSEICAPFRTAAAWYLWktskLADYTKP 222 Schizosaccharomyces pombe 972h-
3OGD_A    251 RFp---------GMT-PAQIRRYAERWKP---WRSYALL----HIWYTEG 283 Escherichia coli K12
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