1YD6,1YCZ


Conserved Protein Domain Family
GIYc

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smart00465: GIYc 
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GIY-YIG type nucleases (URI domain)
Statistics
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PSSM-Id: 214677
Aligned: 74 rows
Threshold Bit Score: 32.008
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1YD6_A          15 QPGCYLMKD------KHGTVIYVGKAKSLKERVRSYFTGThd---------gK--TQRLVEEIaDFEYIVTSSNAe---- 73  Bacillus cald...
CAB11811         4 NNHFFYVVK------CKDNSWYAGYTNDLHKRVKTHNdgkga-----kytkvRrpVELIFAES-FSTKREAMQ------- 64  Bacillus subt...
AAC44904         4 SNWSVYLIL------CENSAFYCGISPNPQQRLAIHTagkga-----kytrvFkpVAMRIVAG-GMDKGTALK------- 64  Neisseria gon...
AAF05189         6 KSWELYMVQ------TPHQMLYTGVSVDVDRRFRLHCsgrga-----kflrnKqpLQLVYRSKcRFTHSEALV------- 67  Xestia c-nigr...
AAB37804       171 EFYGVYCLIsrsdrpCYKNRCYIGYTVDPNRRIMQHNGGRdkgga--kktdsRgpWDMVCVVHgFPNHVAALHFEwawqn 248 Caenorhabditi...
TIGR:At2g30350  26 GFFACYLLTsls--prHKGQTYIGFTVNPRRRIRQHNG-Eitsga--wrtkkKrpWEMVLCIYgFPTNVSALQFEwa--- 97  thale cress
NP_009787       12 DFYCCYLLQs----iNKRQSFYVGSTPNPVRRLRQHNGKLavggayrtkrdgSrpWEMIMIVRgFPSKIAALQ------- 80  Saccharomyces...
CAA50274         7 NGFYFYVLW------CADQTLYTGYTVNLKQRVARHNsgqgak---ytrvpkRrpVQLLYYES-FENQHDAMS------- 69  Pediococcus a...
EGB32443         2 TPWFLYLIR------TADNKLYTGITTDVERRYQQHQsgkga-----kalrgKgeLTLVFSAP-VGDRSLALR------- 62  Escherichia c...
NP_046238        7 KVWCVYIVR------RDDGQLYTGITSDLSRRLGEHArgvga-----rclrgAkrLQLLYCSAsAYDHKTAAQ------- 68  OpMNPV
1YD6_A          74 ----aLILEMNLIKKHDP----KYNVMLKD 95  Bacillus caldotenax
CAB11811        65 -------AEYYFKKLTRk----KKELYIEE 83  Bacillus subtilis subsp. subtilis str. 168
AAC44904        65 -------QEIAVKKLTAa----QKRQLWEQ 83  Neisseria gonorrhoeae
AAF05189        68 -------VEYRVKKWCk-----SKKLLLIS 85  Xestia c-nigrum granulovirus
AAB37804       249 plvskSLKEKQLRKERKEtp-fAFQLRIAC 277 Caenorhabditis elegans
TIGR:At2g30350  98 ---wqHPRESVAVREAAAaf-kSFSGVAIQ 123 thale cress
NP_009787       81 -------FEHAWQHGYQThyiaEKDRVVKH 103 Saccharomyces cerevisiae S288c
CAA50274        70 -------AEYFFKKQSR-----KEKLKYLK 87  Pediococcus acidilactici
EGB32443        63 -------AEYRVKQLTKr----QKERLVAE 81  Escherichia coli E1520
NP_046238       69 -------MEYHLKRKRGk----YFKLRLIK 87  OpMNPV
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