3H0G


Conserved Protein Domain Family
ZnF_C2C2

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smart00440: ZnF_C2C2 
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C2C2 Zinc finger
Nucleic-acid-binding motif in transcriptional elongation factor TFIIS and RNA polymerases.
Statistics
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PSSM-Id: 128717
View PSSM: smart00440
Aligned: 20 rows
Threshold Bit Score: 60.4207
Threshold Setting Gi: 19114147
Created: 12-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3H0G_I        73 KECPRCHQHEAVFYQTHSRRGDTMMTLIYVCVHCGFAFEE 112 Schizosaccharomyces pombe 972h-
Q65252       204 YKCPNCKQRMCTYREVQTRALDEPSTIFCTCKKCGHEFIG 243 African swine fever virus
O92968        38 LPCPSCQSKNTMPMMIQTRSADEPPLIKYACKNCQKSFNP 77  Orf virus
Q85373       157 TPCPNCKSRNTTPMMIQTRAADEPPLVRHACRDCKQHFKP 196 Variola major virus
Q98202       155 APCPVCRGLNTTPMILQTRASDEEPTVRYVCKDCNKHFSP 194 Molluscum contagiosum virus subtype 1
NP_181390    338 FKCGRCGQRKCTYYQMQTRSADEPMTTYVTCVNCDNHWKF 377 thale cress
XP_002710525 261 FTCGKCKKKNCTYTQVQTRSADEPMTTFVVCNECGNRWKF 300 rabbit
S47663       141 LQCGKCKSRKTSYYEMQTRSADEPMTVFAKCHSCGSRWKQ 180 Paramecium bursaria Chlorella virus CVK2
NP_012597     84 eKCPQCGNEEMNYHTLQLRSADEGATVFYTCTSCGYKFRt 123 Saccharomyces cerevisiae S288c
EGA78850      61 RECPKCHSRENVFFQSQQRRKDTSMVLFFVCLSCSHIFTS 100 Saccharomyces cerevisiae Vin13
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