Conserved Protein Domain Family
AT_hook
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smart00384: AT_hook 
DNA binding domain with preference for A/T rich regions
Small DNA-binding motif first described in the high mobility group non-histone chromosomal protein HMG-I(Y).
Links
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Statistics
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PSSM-Id: 197691
Aligned: 49 rows
Threshold Bit Score: 28.3635
Created: 13-Jul-2011
Updated: 16-Jan-2013
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
P48786        263 KRSRGRPRKVQNS 275  parsley
XP_002096906   92 TKGRGRPKSSGGA 104  Drosophila yakuba
AAB60864      291 TGKRGRPRNTEKA 303  human
AAG00239      731 RKKRGRPKKFDRI 743  thale cress
NP_505543     138 QKRRGRPRKTDAA 150  nematode
CAY78863        6 AKKRGRPRKSVVA 18   Saccharomyces cerevisiae EC1118
NP_143421      84 EKGRGRPKKYSTR 96   Pyrococcus horikoshii OT3
XP_954589     363 lKKRGRPRKTIA- 374  Theileria annulata strain Ankara
CAA17138      131 KKKRGRPRKYAAD 143  thale cress
NP_497136      54 KKPRGRPKKYEDS 66   nematode
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