1VIO,1V9F,3BBU,3DH3,1KSK


Conserved Protein Domain Family
S4

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smart00363: S4 
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S4 RNA-binding domain
Statistics
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PSSM-Id: 214638
Aligned: 99 rows
Threshold Bit Score: 30.639
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1VIO_A        3 LRLDKFIAENvG-LTRSQATKAIRQSAVKINGEIVKSGSVQI----SQEDEIYFED-ELLTWIEE 61  Haemophilus influenzae
O51343      341 LLVDLMLDSK-IvPSKSEGRRLIDSGGVYINGKRVESQSHLLtkkdFNNNEVELRV-----GKKK 399 Lyme disease spirochete
AAA24707    358 DLMQALVDSE-LqPSRGQARKTIASNAITINGEKQSDPEYFF----KEEDRLFGRF-TLLRRGKK 416 Escherichia coli
CAB08289    360 GIVDLLVASg-LsPSRGAARRTIDEGGVLVNNIRIQSEEWTP----RTSDFLHGRW-LVLRRGKR 418 Mycobacterium leprae
NP_439752   334 MGLATLLKEAgLvPSTSEAIRSAQQGGVKINGEKVDNVKDNA----PKGTNVYQVG--KRKFARV 392 Haemophilus influenzae Rd KW20
P41256      342 PRLSQLLVQVhLaASTSEAMRKMKEGAVRVDWRRVVDPATIL-----ALDAVYLLQfGKRHFARV 401 Acidithiobacillus ferrooxidans
ZP_05405451 269 TNLIDYLVETkFiKSKSEARRLISQKGLTINNKHVLDLNQIIe--wKEELQIIRKG-KKSFLTIK 330 Mycoplasma genitalium G37
ACZ33336    346 RWLDLFLVLg-LcKSKGEIRRLIEQKGVYINNVPI-ANEHSV----CEEQDICYGH----YVLLA 400 Chlamydophila pneumoniae LPCoLN
NP_207567   342 GILDVLKQIG-FcPSTSQARRDIQGGGVKINQEVIKNESYRFv---KGNYVIQLGK---KRFMKL 399 Helicobacter pylori 26695
AAA22718     29 SLVDVLVQSK-LsPSKRQAREDIQNGAVYINGERQTEINYTL----SGEDRIENQF-TVLRRGKK 87  Bacillus subtilis
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