2APO,1SQW


Conserved Protein Domain Family
PUA

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smart00359: PUA 
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Putative RNA-binding Domain in PseudoUridine synthase and Archaeosine transglycosylase
Statistics
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PSSM-Id: 214635
Aligned: 53 rows
Threshold Bit Score: 33.7695
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2APO_A    270 KKVVVKDSAVDAICHGA-DVYVRGIAKLSKGIGKGETVLVETLKGEAVAVGKALMNTKEILNAD-----KGVAVDVERVY 343 Methanocaldococcus...
BAA29340  135 KWVIIDRGAVEPVKNGA-NVLPVGVIEAEESIRRGDEVIVVSEDGEVVGVGIAKKDYNELINPQa----RGTGVKMKRKS 209 Pyrococcus horikos...
Q60377    132 KIIKIKNDVVEFLKNRKgSVLRPGIVEFTDDIEEKDDVIIVDENDRVVGVGLAVVSSEDIKNMe-----KGKVVKVRFFI 206 Methanocaldococcus...
AAB90533   79 MRVVVMDEVSDFIAAGK-SVFAKHVVEVDEEIRANDEVVVVNTADKLLATGRAVLSAFEMLEME-----RGMAVKVRQGV 152 Archaeoglobus fulg...
BAA29204  501 YWVEVDFDIRG-------DVFAAGVERADEGIRPNDIVGIVR-DGRVVAVGRAVLSGEEMVRAK-----KGIAVRVRKRV 567 Pyrococcus horikos...
AAB91164   88 NRVWVNERGEMLFLYGR-DIFAGSVERASE-FGENSIVFVCNRFDDVLGIGRSRHSSDELSNLPedkvfVENLVDRGEYL 165 Archaeoglobus fulg...
BAA30215  508 MRVVVNKEAEPFARKGK-DVFAKFVIFADPGIRPYDEVLVVNENDELLATGQALLSGREMIVFQ-----YGRAVKVRKGV 581 Pyrococcus horikos...
Q57878    473 YRVVVNKEAEEFAREGR-NVFAKFVIDCDEELRPYEEVLVVNEDDELLAYGTTILNGIELREFn-----YGLAVKVRGGL 546 Methanocaldococcus...
O26278    591 WRVAVNEESEPFARKGK-SVFAKFIIDCDNNIRANDEVLIVNADDELLATGKALLCAEEMMDLn-----HGQAVKTRKGG 664 Methanothermobacte...
NP_248413  93 NYAIVNEKAEALFLYGR-DIFKESIIEV---KGFGRIAVFNK-NREFLGIGLFDGKIIKNIKd------KGWYLREGG-- 159 Methanocaldococcus...
2APO_A    344 M 344 Methanocaldococcus jannaschii
BAA29340  210 K 210 Pyrococcus horikoshii OT3
Q60377    207 K 207 Methanocaldococcus jannaschii DSM 2661
AAB90533  153 K 153 Archaeoglobus fulgidus DSM 4304
BAA29204  568 K 568 Pyrococcus horikoshii OT3
AAB91164  166 R 166 Archaeoglobus fulgidus DSM 4304
BAA30215  582 E 582 Pyrococcus horikoshii OT3
Q57878    547 K 547 Methanocaldococcus jannaschii
O26278    665 F 665 Methanothermobacter thermautotrophicus str. Delta H
NP_248413     -     Methanocaldococcus jannaschii DSM 2661
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