Conserved Protein Domain Family
GED

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smart00302: GED 
Dynamin GTPase effector domain
Statistics
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PSSM-Id: 128597
View PSSM: smart00302
Aligned: 19 rows
Threshold Bit Score: 74.5795
Threshold Setting Gi: 2462734
Created: 12-Jul-2011
Updated: 16-Jan-2013
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
                         10        20        30        40        50        60        70        80
                 ....*....|....*....|....*....|....*....|....*....|....*....|....*....|....*....|
gi 2462734   538 YHAHLLQQAFDMKMRITSYWTIVLRRVVDNLALYLQFSVKNLVNSQfqkEIVAEM---VDpraGGGIDRMLEESPSVASK 614
gi 188901    569 ATDSSMEEIFQHLMAYHQEASKRISSHIPLIIQFFMLQTYGQQLQK---AMLQLL---QD---KDTYSWLLKERSDTSDK 639
gi 75319500  513 YNDSYLRRIGTTILSYVNMVCATLRNSIPKSIVYCQVREAKRSLLD---HFFTEL---GKm-eTKRLSSLLNEDPAIMER 585
gi 6093454   611 QCPSFALEMVSHVKAYFTGASKRLSNQIPLIILSTVLHDFGNYLQT---SMLHLL---QG---KEEINYLLQEDHEAANQ 681
gi 2576411   666 QEAVEIQITKLLLRSYYDIVRKNIEDSVPKAIMHFLVNHTKRELHN---VFIKKL---YR---ENLFEEMLQEPDEIAVK 736
gi 19112806  689 REEVEVDLIKELITSYFNLTRKIIIDQVPKVIMHLLVNASKDAIQN---RLVSKL---YR---EDFFDTLLIEDENVKSE 759
gi 119630012 689 ssvSSFTEIGIHLNAYFLETSKRLANQIPFIIQYFMLRENGDSLQK---AMMQIL---QE---KNRYSWLLQEQSETATK 759
gi 6996930   538 QKGLTTTEMTQHLKAYYQECRRNIGRQIPLIIQYFILKTFGEEIEK---MMLQLL---QD---TSKCSWFLEEQSDTREK 608
gi 62454     627 KNAIFIQEMISHTKAYFTGASKRLSNQIPLIILSAVLHDFGDNLQS---SMLHLL---QE---REKLNSLLQENSEAAKM 697
gi 3341679   515 YGDGHFRKIASNVAAYIKMVAETLVNTIPKAVVHCQVRQAKLSLLN---YFYAQIsqsQQ---GKRLGQLLDENPALMER 588
                         90       100
                 ....*....|....*....|.
gi 2462734   615 REKLKNSLKLLKESKDVVAAI 635
gi 188901    640 RKFLKERLARLTQARRRLAQF 660
gi 75319500  586 RSALAKRLELYRSAQAEIDAV 606
gi 6093454   682 QKLLTSRISHLNKAYQYLVDF 702
gi 2576411   737 RKRTQETLHVLQQAYRTLDEl 757
gi 19112806  760 REKCERLLSVYNQANKIISTV 780
gi 119630012 760 RRILKERIYRLTQARHALCQF 780
gi 6996930   609 KKFLKRRLLRLDEARQKLAKF 629
gi 62454     698 RNYLSGRVNRLSKAYQCLKDF 718
gi 3341679   589 RMQCAKRLELYKKARDEIDAa 609
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