3LVG,3LVG,1XI4,1XI4,1XI4,1XI4


Conserved Protein Domain Family
CLH

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smart00299: CLH 
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Clathrin heavy chain repeat homology
Statistics
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PSSM-Id: 128594
View PSSM: smart00299
Aligned: 47 rows
Threshold Bit Score: 73.8475
Threshold Setting Gi: 6323177
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3LVG_A     223 LHIVVHADELEELINYYQDRGYFEELITMLEAALGL-E--R--A--HMGMFTELAILYSKFKPQKMREHLEl-------- 287  cattle
NP_594148  534 MFNSNPSINLEKIVDIFMSQNLVQQATAFLLDALKDdN--P--E--HSHLQTRLLEINLINAPQVADAILGn-------- 599  Schizosaccharomy...
NP_594148 1418 laaltPRIDHPRVIRIFEKSENTPLILNFMVAIQHL-N--I--QavNHAYNDLLIEMEDYQSLQDSIENYDhfdaialar 1492 Schizosaccharomy...
CAY79565   543 nPETASQIDIEKIADLFFSQNHIQQGTSLLLDALKG-Dt-P--D--QGHLQTRVLEVNLLHAPQVADAILGn-------- 608  Saccharomyces ce...
NP_011309 1429 LTSLTPRLDIPRTVKIFSKSDNLPLIKPFLINVLPK-N--NsvV--NQAYHDLMIEEEDYKALQDAVDSYDk-------- 1495 Saccharomyces ce...
AAC49294   550 qMEGGCPVDYNTITDLFLQRNLIREATAFLLDVLKP-Nl-P--E--HGYLQTKVLEINLVTFPNVADAILAn-------- 615  soybean
AAC49294  1436 LNVLALRVDQARVVDIMRKAGHLRLVKPYMVAVQSN-NvsA--V--NEALNEIYVEEEDYDRLRESIDLHDn-------- 1502 soybean
XP_642717  537 keEGGPYIDANQVVELFSARNMIQETSNFLFAILDG-Dr-P--Q--DANLQTKLLEINLLHAPQNADAIMGg-------- 602  Dictyostelium di...
XP_642717 1424 LSVLSPRIDHTRAVTLIRSLGHLPLVKPYLVSAQDQ-N--V--AalNEALNELYVEEEDYESLRSSIDANSnfgtialaq 1498 Dictyostelium di...
CAA64752  1423 llvlSPRLDHTWTVSFFSKAGQLPLVKPYLRSVQSH-NnkS--V--NEALNHLLTEEEDYQGLRASIDAYDnfdnislaq 1497 human
3LVG_A     288 ---F-----------WSRVNIPKVLRAAEQAH-L-WAELVFLYDKYEEYDNAIIT--MMNHP--T--DAwkeGQFKD--- 342  cattle
NP_594148  600 --qM-----------FTHFDRAVIASLCERAG-L-VQRALELYDKPADIKRVIVH--SNLL------NP---EWLMN--- 650  Schizosaccharomy...
NP_594148 1493 rleK-----------HSLLEFRRIAAYIYRKN-KrWTQSIELSKQDRFYKDAIIT--ARDSDqtT--IA---EDLMK--- 1550 Schizosaccharomy...
CAY79565   609 ---Ni----------FSHYDKPTIASLSEKAG-L-YQRALENYTDIKDIKRCVVH--TNALP------I---DWLVG--- 659  Saccharomyces ce...
NP_011309 1496 ---FdqlglasrlesHKLIFFKKIGALLYRRNkK-WAKSLSILKEEKLWKDAIETaaISQDP--K--VV---EALLT--- 1561 Saccharomyces ce...
AAC49294   616 --gM-----------FSHYDRPRIAQLCEKAG-L-YVRALQHYTELPDIKRVIVN--T--HA--I--EP---QSLVE--- 666  soybean
AAC49294  1503 ---FdqiglaqkietHELLEMRRVAAY--------------IYKKAGRWKQSIEL--CHKKD--T--LY---KDAMEtvs 1556 soybean
XP_642717  603 --qK-----------FTHYNRLRIGGLCEKAG-L-YQRALEHYTDLADIKRVLSH--AGHM---V--NQ---EFLVS--- 654  Dictyostelium di...
XP_642717 1499 kleK-----------HELLEFRRIAAYLYKKN-NrWAQSVELSKKDKLYKDAIQS--ASDSK--NpaIG---EELLQ--- 1556 Dictyostelium di...
CAA64752  1498 qleK-----------HQLMEFRCIAAYLYKGN-NwWAQSVELCKKDHLYKDAMQH--AAESRdaE--LA---QKLLQ--- 1555 human
3LVG_A     343 -------------IITKVANVELYYRAIQFYLEFKP 365  cattle
NP_594148  651 -------------YFSRFSPDEVYDYLREMLRSNLR 673  Schizosaccharomyces pombe 972h-
NP_594148 1551 -------------YFVEIGNYECFAAILYTCYHLLR 1573 Schizosaccharomyces pombe 972h-
CAY79565   660 -------------YFGK-LNVEQSLACLKALMDNNI 681  Saccharomyces cerevisiae EC1118
NP_011309 1562 -------------YFVETGNREGFVALLYAAYNLVR 1584 Saccharomyces cerevisiae S288c
AAC49294   667 -------------FFGT-LSREWALECMKDLLLVNl 688  soybean
AAC49294  1557 qsgdrelveellvYFIDQGKKECFASCLFVCYDLIR 1592 soybean
XP_642717  655 -------------YFGS-LNPEDRMECMRDFLRTNP 676  Dictyostelium discoideum AX4
XP_642717 1557 -------------YFVDQQNNSAFAACLYTCYDFLK 1579 Dictyostelium discoideum AX4
CAA64752  1556 -------------WFLEEGKRECFAACLFTCYDLLR 1578 human
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