1W25


Conserved Protein Domain Family
GGDEF

?
smart00267: GGDEF 
Click on image for an interactive view with Cn3D
diguanylate cyclase
Diguanylate cyclase, present in a variety of bacteria.
Statistics
?
PSSM-Id: 128563
View PSSM: smart00267
Aligned: 61 rows
Threshold Bit Score: 82.6805
Threshold Setting Gi: 1176698
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
1W25_A        286 ELAVTDQLTGLHNRRYMTGQLd-SLVKRATLGGDP-VSALLIDIDFFKKINDTFGHDIGDEVLREFALRLASNVRA---- 359  Caulobacter c...
YP_001526001  313 RLAFTDMHTGLSNRTGLLRLC--TGRPTRP------SGAVVLMLRDLGVVKTSFGDDWAEPMIVETANLLSRMLPQ---- 380  Azorhizobium ...
YP_859135     229 ENAMRFPVSDLPNKALLMEMLe-QVVARKQT-----TALMIITCETLRDTAGVLKEAQREILLLTLVEKLKSVLSP---- 298  Escherichia c...
EFW51310      299 RLAYVDPVVHLPNVRALNRAL--RDAPW--------SALCYLRIPGMEMLVKNYGIMLRIQYKQKLSHWLSPLLEP---- 364  Shigella dyse...
NP_442466     429 QQTAYDPLTQLPNWIIFNRQLtlALLDALYEGKM--VGVLVIAMDRFKRINESFGHKTGDGLLQEVADRLNQKLSPlaay 506  Synechocystis...
NP_388309     130 SYVAVDRVTGFDNKQRMKLELs-EEIKRAERYGNS-FVFLLLHMHYFKEFKSLYGEKETDRLFQYVGQQIRTSVRE---- 203  Bacillus subt...
BAI87765      141 DRKFRVVIKRDERLLYFFDVT--EQIQIEKLYENErTVLAYIFLDNYDDVTQGLDDQTRSTMNSQVTSLLNAWAQEy--- 215  Bacillus subt...
EGK21101       43 LQALTDPLTLLPNFRALEQAP---EQEAG-------KSFCCLRIDNLEFMSRHYGLMMRVHCIRSICRTLLPLMQE---- 108  Shigella flex...
P45365        267 LVNRRETAGGFLPRDVFMRHLe-QITRAREAQGGV-HGLVIIDVDGSQGILNALGLTATEKLLRELESLLSKTMTP---- 340  Thiocystis vi...
EGB38334      382 QLIQFDPMTGLPNRNNLHNYLd-DLVDKAVS-----PVVYLIGVDHIQDVIDSLGYAWADQALLEVVNRFREKLKP---- 451  Escherichia c...
1W25_A        360 IDLPCRYGGEEFVVIMPDT-ALADALRIAERIRMHVSGSPFTvahGR-EMLNVTISIGVSAT--AGEGDTPEALLKRADE 435  Caulobacter c...
YP_001526001  381 EACLGRTGESEFTVVTWQP---GAAAELAETLIGRLRSAIES---GG-RRFYLRVGLGVVE-----RPGDATYLLRDAEM 448  Azorhizobium ...
YP_859135     299 RMILAQISGYDFAVIANGVqEPWHAITLGQQVLTIMSERLPI---ER-IQLRPHCSIGVAMF---YGDLTAEQLYSRAIS 371  Escherichia c...
EFW51310      365 GEDVYQLSGNDLALRLNTE-SHQERITALDSHLKQFRFFWDG---MP-----MQPQIGVSYCyvrSPVNHIYLLLGELNT 435  Shigella dyse...
NP_442466     507 SPLLSRWHGDGFTILLTQIsDNQEMIPLCERLLSTFQEPFFL---QG-QPIYLTASMGISTA--PYDGETAESLLKFAEI 580  Synechocystis...
NP_388309     204 TDKKFRPSDERIGIVLTHT-PAEHMPAVLTKLKKQLDTYQLE---NGk---YVSLTFHVCYLpyRNDIQTADQFLEELEN 276  Bacillus subt...
BAI87765      216 GIFLKRTSSERFIAVLNEH-ILTELENSKFSILDEVREKTSF---DG---VALTLSVGVGA-----SVSSLKELGDLAQS 283  Bacillus subt...
EGK21101      109 NEKLYQLPGSELLLVLSGP-ETEGRLQHMVNILNSRQIHWNN---TG-----LDMGYGAAWG---RFDGNQETLQPLLGQ 176  Shigella flex...
P45365        341 EESATRMDDFRYGLLAKRE-TLSKLEALASTLCQQLSGLKPQ---DRdIKLEVSVSVGVGLF--DPPADDAFAMVSRAEK 414  Thiocystis vi...
EGB38334      452 DQYLCRIEGTQFVLVSLEN-DVSNITQIADELRNVVSKPIMI---DD-KPFPLTLSIGISY----DLGKNRDYLLSTAHN 522  Escherichia c...
1W25_A        436 GVYQAKASGRNAVVGK 451  Caulobacter crescentus CB15
YP_001526001  449 AARDCRDGHLLHFAEH 464  Azorhizobium caulinodans ORS 571
YP_859135     372 AAFTARHKGKNQIQFF 387  Escherichia coli APEC O1
EFW51310      436 VAELSIVTNAPENMQR 451  Shigella dysenteriae CDC 74-1112
NP_442466     581 ALTRAKCQGKNTYQFY 596  Synechocystis sp. PCC 6803
NP_388309     277 EMMMNEL--------- 283  Bacillus subtilis subsp. subtilis str. 168
BAI87765      284 SLDLALGRGGDQVAIK 299  Bacillus subtilis subsp. natto BEST195
EGK21101      177 LSWLAEQSCAHHHVLA 192  Shigella flexneri VA-6
P45365        415 AAAGAKSAGGNQAHVW 430  Thiocystis violacea
EGB38334      523 AMDYIRKNGGNGWQFF 538  Escherichia coli E482
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap