1AU1,3OQ3


Conserved Protein Domain Family
IFabd

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smart00076: IFabd 
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Interferon alpha, beta and delta.
Interferons produce antiviral and antiproliferative responses in cells. They are classified into five groups, all of them related but gamma-interferon.
Statistics
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PSSM-Id: 197503
Aligned: 16 rows
Threshold Bit Score: 149.769
Created: 18-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1AU1_A        37 NFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQD-SSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRG- 114 human
ACE80215      36 NFEVPEEIMQPPQFQKEDAVLIIHEMLQQIFGILRRN-FSSTGWNETVIKTILVELDGQMDDLETILEEIMEEENFPRG- 113 pig
AAA72588      37 NFDIPEEIKQLQQFQKEDAALTIYEMLQNIFAIFRQD-SSSTGWNETIVENLLANVYHQINHLKTVLEEKLEKEDFTRG- 114 synthetic const...
NP_001015617  58 DFQMPEEMKQAQQFQKEDAILVIYEMLQQIFNILTRD-FSSTGWSETIIEDLLEELYEQMNHLEPIQKEIMQKQNSTMG- 135 cattle
AEI30863      58 DFAFPKELFDGQRLQEAQALSVVHVMTQKVFHLFCTN-TSSAPWNMTLLEELCSGLSEQLDDLDACPLQEAGLAETPLM- 135 dog
NP_062000     56 DFKIPMEVMHPSQMEKSYTAFAIQVMLQNVFLVFRSN-FSSTGWNETIVESLLDELHQQTELLEIILKEKQEERLTWVT- 133 Norway rat
ADU60333      67 SCSFNDTILDTSNTR--QADKTTHDILQHLFKILSSP-STPAHWNDSQRQSLLNRIHRYTQHLEQCLDSSDTRSRTRWP- 142 chicken
ABI17928      66 PCSFPDTLLDTNDTQ--QAAHTALHLLQHLFDTLSSP-STPAHWLHTARHDLLNQLQHHIHHLERCFPADAARLHRRGP- 141 mallard
NP_001002832  57 DFKFPWKRESITQIQKTEGTCYCYLMLQQISSVFSKK-DSRAAWNNTLLDQLLSSLDLGLRRLEHMKKDNMDCPHVG--- 132 pig
AEI30867      58 DFAFPQDVFGGDQSHKAQALSVVHVTNQKIFHFFCTEaSSSAAWNTTLLEEFCTGLDRQLTRLEACVLQEVEEGEAPLTn 137 domestic cat
1AU1_A       115 ---KlMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNF 154 human
ACE80215     114 ---D-MTILHLKKYYLSILQYLKSKEYRSCAWTVVQVEILRNF 152 pig
AAA72588     115 ---KlMSSLHLKRYYGRILHYLKAKEYSHCAWTIVRVEILRNF 154 synthetic construct
NP_001015617 136 ---D-TTVLHLRKYYFNLVQYLKSKEYNRCAWTVVRVQILRNF 174 cattle
AEI30863     136 ---H--EDSTLRTYFQRISLYLQDRNHSPCAWEMVRAEIGRSF 173 dog
NP_062000    134 ---S-TTTLGLKSYYWRVQRYLKDKKYNSYAWMVVRAEVFRNF 172 Norway rat
ADU60333     143 ---R-NLHLTIKKHFSCLHTFLQDNDYSACAWEHVRLQARAWF 181 chicken
ABI17928     142 ---R-NLHLSINKYFGCIQHFLQNHTYSPCAWDHVRLEAHACF 180 mallard
NP_001002832 133 --------SALRKYFQGIQLYLKEKKYSPCAWEIVRVEIERCF 167 pig
AEI30867     138 ediH-PEDSILRNYFQRLSLYLQEKKYSPCAWEIVRAEIMRSL 179 domestic cat
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