Conserved Protein Domain Family
Cas5fv_helical

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pfam20158: Cas5fv_helical 
Cas5fv helical domain
This entry represents the Cas5fv helical domain.
Statistics
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PSSM-Id: 498582
Aligned: 16 rows
Threshold Bit Score: 222.914
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_008314381 111 SEDQNSFTGMIKAKDVAFNSEFSASLWGVLFMPFPNIVDWILAD----DIQVdTENIPiLDPISVIEQLEFLN-TLKAIE 185 Wohlfahrtiimona...
WP_091991237 108 STDQNAFSGVIKVNDPMLTSDFSKQLWGVLGLSLDEVCCFIKNE----SYSV-NTDIS-LSPTELVELADTLDkKAKPVE 181 Pseudoalteromon...
ETO34575      54 NYDQDSFSGTVNPCHPILTSDYSSQLWEILYLDFNQLCEFIITE----QVEInSRK---LCPILICERFKEIK-KMKKVK 125
RAP35386     108 SEDQNSYTGMIKVDDSIFCSDYSAQLWGILALDVDGLCDFILN-----SKKI-EQKTD-PNPLVIIGRLEEIF-KYKPVL 179
EPJ47990     108 SEDQNSYTGMIQVDSPIFLSDYSSQLWGLLSLEIEDLCEFIIE-----NKTV-TSKIE-HNPLVIMNRLEDIF-KYKPIP 179
WP_139682925 108 STDQNSFTGAIKSNDAMFNSDYSSEFWGILALNIDELINFIVN-----DKLI-VKAIT-LNPISVIFKLESLN-KEKSLA 179 thiotrophic end...
Q6LFU3        76 STDQNSFTGMIKVSDSVFTSEYSSQFWSVLNLDFMQVCDFIIN-----DQQV-EVTIQ-LDPLSIINRLELLN-KEKVLE 147 Photobacterium ...
WP_219350302 118 SEDKNGYMGMVKANHPIFQSDYSYDFWNILSLSIEQLCEFILDDkkvnEFTI-AKPIS-LDPISILCQLEIIS-NFKPLT 194 Kingella negeve...
WP_176579704 111 NTDQNAFTGMIKVNDSAFQSDFSQIFWGILSLDFEKLCQFILE-----NSKF-ESDIE-LNPISILGRLEEIK-KMKAVE 182 Legionella lond...
WP_087142671 117 STDQNSFTGMIKGNDPIFSSDYSNAFWGIITLNFDALCQFIINP----DYTV-ENQRL-FDPVSVLSQLEQLN-KLKAVE 189 Crenothrix poly...
WP_008314381 186 LEGNFKEAYEKIVLCFPDV------DFkVTAKGLFTPISFYTAALYIQLDRLSRQYDLSNVVTAQGGLSGISKRGFT-KK 258 Wohlfahrtiimona...
WP_091991237 182 NLGVYEEVVHLLNNYFSELiteklsSPyVEKSGKIKPVRFYAAALYIQLERLNRKFDMSKAKTKSGKVAGFSKRGFNgKR 261 Pseudoalteromon...
ETO34575     126 DIGNTSEALKILQHFYSDQ------NY-YDKNQMIMPISFYCSALYLQLDKLEKKYDISAALSKKGGLSGIAKKSFT-PK 197
RAP35386     180 NAGLVNEAFVYLNDKYDKF------NG-LNRKEEVLLISLYCSALYLQLERLSTEYDVSSAKTKAGGLSGISNNGFT-KK 251
EPJ47990     180 NEGKVNDAFIYLQSKFEKY------KG-INNKELILPISLYCSSLYLQLERLSSQFDVSSARTKAGGLSGISNNGFT-KK 251
WP_139682925 180 RNSDLEEVLNVFTEKFGDI------KY-FNIKDEVVVISLYASALYLQLERLSKKYDMASAKTKVGGISGISKRGFT-KK 251 thiotrophic end...
Q6LFU3       148 NQGDLAKTVEVLKTHFPDI------EY-LNNKGLITPISIYCSALYLQLARLEVRFDMTTAKTKAGGISGISKRGFT-KK 219 Photobacterium ...
WP_219350302 195 CEGFIKLASEKLSNSFSEY------KP-LNSKGLQLVLPMYCSALYLQMQRLEEGMNIIMPKSARGGISGISKNGFT-PK 266 Kingella negeve...
WP_176579704 183 YAGNAKIASEKLASCFPKY------GP-FDNKGQLKLLPMYCSSLYLQLNRLEKHYDMSGAKSKKGGISGISNNGFT-PK 254 Legionella lond...
WP_087142671 190 VVNHVESALSVLKASFPDA------EY-VSGKGLINPIMFYCSALYLQLSRLSEHCDLSNALTKSGGISGISKRGFT-AK 261 Crenothrix poly...
WP_008314381 259 DFMKRYTTGPKKL 271 Wohlfahrtiimonas chitiniclastica
WP_091991237 262 DFMKNFVTGGEKK 274 Pseudoalteromonas denitrificans
ETO34575     198 DFMKQFA--GRKM 208
RAP35386     252 DFMARYTSGEKKK 264
EPJ47990     252 DFMSRYTSGAKKK 264
WP_139682925 252 DFMDKFTTGAKKK 264 thiotrophic endosymbiont of Bathymodiolus puteoserpentis (Logatchev)
Q6LFU3       220 DFMARYTTGPKKT 232 Photobacterium profundum
WP_219350302 267 DMMNAYVTNGKKL 279 Kingella negevensis
WP_176579704 255 DFMDRYTTGPKKL 267 Legionella londiniensis
WP_087142671 262 DFMDRFTTGSKKP 274 Crenothrix polyspora
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