Conserved Protein Domain Family
DUF6456

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pfam20057: DUF6456 (This model is not part of the current CDD release)
Domain of unknown function (DUF6456)
This presumed domain is sometimes associated with a helix-turn-helix domain suggesting that it may be a small molecule ligand binding domain. This family of proteins is found in bacteria.
Statistics
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PSSM-Id: 523819
Aligned: 214 rows
Threshold Bit Score: 94.1175
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_097174122 146 VTVNHA------ESP-----------------LAWLRRRRG-RNGEP-ILDDGQFAAGERLRADHTHGSIVPGLrGMAWS 200 Stappia indica
WP_127567718 111 ALANGD------ASP-----------------VARYAVA---RPGRAaLLERVHVTAADRLRADYDASTLRSRV-TSDWS 163 Glycocaulis alk...
WP_109253231 115 GRLNAVradldsVSP-----------------VARYARA---QGDVPpLLDPVHVTAAETLARDYERSALRSRV-TSDWT 173 Marinicauda salina
WP_009803330  90 VNPNTC------DGP-----------------LARYAKP---RNGQPpLLEPTHLSAADSLMRDYELSSLASRV-TQDWS 142 Oceanicaulis sp...
WP_091768001 109 VRTNIR------EDV-----------------PGRWAVQ----------LEPQERAAAERFCTDYARSSLRQHT-TRNWS 154 Maricaulis sali...
Q0AR99       107 ARANRR------EGP-----------------LGPWLDG----------LEPHQRQAGERFIADYHRSTLMSPV-TRNWS 152 Maricaulis mari...
WP_008602777 101 V--NRA------EEP-----------------LGWLHARGK-ITDQ-------QFEAGQKLRADFMAAGGMPRI-TMAWD 146 Pacificimonas f...
SIO07765      63 VTVNLA------ESP-----------------LAWLHARGH-LTDR-------QLDAGEKLREDWERAHMAPGI-TMNWS 110
OYU49020      96 VRVNTR------EDP-----------------LEFFRRG---REGGR-LVGAAEIEAADRLRRDLAMAQAIPQV-TANWS 147
WP_117396164  72 QKLWLAnpnpqqQSPdqcepsgtalpivgngqLNRLCRSTNkRGG---LLSPDHILAANRLERLVERAMLTPQI-TRDYS 147 Maritalea myrio...
WP_097174122 201 ALG-SgggsssggrdprgglVEltNSTLAARARLERAMREVGPELAGVLIDVCCELKGLEQVERERRWPPRSAKVVLLLG 279 Stappia indica
WP_127567718 164 GVPrsgpr-------gghdpAGapARALDARERVMAALAAAGPGLDRLLINIVIRETGMERAVRDLDWPDKAGGTALHLA 236 Glycocaulis alk...
WP_109253231 174 APPqaktrg------aprdpADlpASRLDARARVMDALAAAGPGLDRLLVDVVLRETGMSAAERDLGWPARAGAPALRLA 247 Marinicauda salina
WP_009803330 143 GIPggggrs------aprdrADapLRRMKAQERVMEALAAVGPGLDHWLVEILLRQSAMTDAEHRLNWPSRSGAQALRLA 216 Oceanicaulis sp...
WP_091768001 155 LAAeirqtg------whggpESasLAAIAAKDRVMDALDALGSGMDQLVVAVCIREESLAAVERRFGWAQRSGKTVLKLA 228 Maricaulis sali...
Q0AR99       153 PTAqrrseg------rrhgpEDaaVSALAAKERVMNALDALGPAFARVIEAALVHEDSAAALERRFGWAARSGRTVLGLA 226 Maricaulis mari...
WP_008602777 147 AAPaAtgrra------vpdglLpgERITAAKRRFEEAMDLVGRGPAEMLRRTVCIGEGMETAEKAMTLPVRSGRVVLMMA 220 Pacificimonas f...
SIO07765     111 LVPrDqnrrs------geqhlEpsEVQISARQRFEAAQSALGKDLHDIAWRVICAGETVPNAERNLNWPARSGKIVLRIA 184
OYU49020     148 RLVvdgag--------fhpgLTksEAILEARRRVDTAMRAVGPDFANILMDICGFSKGLEAFEKEHALPLRSGKVVVGLA 219
WP_117396164 148 QLNatlgqt------kshgqNDisDMAADARKELARLYAQLPADCINLLVDVCGFSKGLQEVEANRNWPRRSAKLVAKIG 221 Maritalea myrio...
WP_097174122 280 LTRLA-----------RHYGT 289 Stappia indica
WP_127567718 237 LERLA-----------IHYGL 246 Glycocaulis alkaliphilus
WP_109253231 248 LERVA-----------VHYRL 257 Marinicauda salina
WP_009803330 217 LDRLA-----------VHYRL 226 Oceanicaulis sp. HTCC2633
WP_091768001 229 LQQLA-----------RHYGL 238 Maricaulis salignorans
Q0AR99       227 LTRLA-----------EIYRL 236 Maricaulis maris MCS10
WP_008602777 221 LDRIA-----------DFYRL 230 Pacificimonas flava
SIO07765     185 LDRLA-----------DFYRL 194
OYU49020     220 FRALA-----------RHYGL 229
WP_117396164 222 LDQLGaiwgigelavpNHWRR 242 Maritalea myrionectae
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