Conserved Protein Domain Family
DUF6404
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pfam19942: DUF6404 (This model is not part of the current CDD release)
Family of unknown function (DUF6404)
This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0001055) is described by MIBiG as an example of the following biosynthetic classes, NRP (non-ribosomal peptide) and polyketide, in particular the yersiniabactin biosynthetic gene cluster from Escherichia coli. This family appears to be predominantly found in Proteobacteria.
Links
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Statistics
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PSSM-Id: 523798
Aligned: 45 rows
Threshold Bit Score: 65.7758
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
WP_034499733   1 MDFET---------------------------------------KKQRALKLLAKTG--MWK-STYAPPYVNLLWRFNFR 38  Buttiauxella ag...
2_pfamImport   1 DTTTEalraictdgaaapkprpatqsgtpsrktaarrkarsrrtRLPLALAALAEGG--ITG-NSAYAPALRGLARMGVI 77 
WP_012030722   4 EEYPE---------------------------------------SIRQILAYLWTAR--IPN-SYKSPKIYRVLWQRGLE 41  Dichelobacter n...
WP_004142306   1 MSYPA---------------------------------------SIEKALAYLQTKD--IPKgYRKHPWFYRWLWKKGIE 39  Cardiobacterium...
WP_004142308   1 MSYPP---------------------------------------SIEKALAYLKAADipNYLkNEKMWFVHRVFWKLGIS 41  Cardiobacterium...
WP_086451615   2 TTFDE---------------------------------------KYARAVEILEQQG--ITR-NAYEPPVARLLRRFGKP 39  Marivivens nive...
WP_101921543   4 ADFEArlarirqttqypappt--------ptgrpnsspprtyrdRLDRALAAAAAAG--ITE-KDCFPPAMRALSAMGIP 72  Tabrizicola sp....
WP_092361835   4 TSFEDrlsrlqerqeqsfra---------asekpahrkattrreRLTLALAHLERGG--VTG-AFAYAPVFRMLAAIGLG 71  Cribrihabitans ...
Q9KMH7         3 QGMTHtfig-------------------------------timnTMEFVRSLLIEKG--ISA-RLAKPYPYLFYKFARLD 48  Vibrio cholerae
WP_010051354   2 TERE----------------------------------------KIDTAVEYLKGQR--IAA-HTAAPLLWRLCWRAGFL 38  Gemmata obscuri...

WP_034499733  39 CRPPHFVPFYMTFLNFSLYFGV----LWGGIMWFLqwr-ndGD-TAGSILLKIVSA-G--------ITFGLIMTVYYALS 103 Buttiauxella ag...
2_pfamImport  78 VKPLYFWSPVALFVFSVVVFSL----AMGGTALAC------LSlGVMPTPVRGMLNaGptvftlliAGMSVVFTAIHWLR 147
WP_012030722  42 IPPPIVADFLKNFIMMSIFSALlllpFFLLYALIFlgh-dvFY-SLIFSLFFSVIL-T--------PIFGAAAAGFWEWQ 110 Dichelobacter n...
WP_004142306  40 IPPPLLSGFFTNMLIFGLICGF----VTALAIFLLier---ntwSFPADFLLRWATlG--------IATGLGGAFGIRRT 104 Cardiobacterium...
WP_004142308  42 FPPAILASFPVNFIYFGIIGTIillsVPLLFIYGLywhnklTAlEWTAYLMLNF------------VIHGTMMARSIQHR 109 Cardiobacterium...
WP_086451615  40 VRPLHFMDLQQLAIFQGATFGV----MWGLFMWVFmws-rgSM-PLSVIIFAIMVA-G--------VTFGLGSAYVILRR 104 Marivivens nive...
WP_101921543  73 VRPLHFKSVTSLFLFGLCLGLG----IFGGVLWLlss--giVP-TPERGALVTVIRfGwpgvfitsLCIGAAFAFVIRRQ 145 Tabrizicola sp....
WP_092361835  72 PRPLFYWSWIGLVIFGFALFTG----IFGGVIYLS------VQfGHVARPVQVMIEaGpdvllvvnTVLALGFAAIHKFK 141 Cribrihabitans ...
Q9KMH7        49 MKPRVFESPLKLFVLQSVLGTV----FWGGFMWLLvwq-fqGF-V-ASQVYASMFF-G--------VITGLLLAVEVARI 112 Vibrio cholerae
WP_010051354  39 IPPPHFLTFLPVALLTGVPLGIgl-nVAVIVLRLLvgkpl-awplaMVGVSGAIL-------------FGSLSAVYYRWS 103 Gemmata obscuri...

WP_034499733 104 RWYYRLPAWKDL 115 Buttiauxella agrestis
2_pfamImport 148 ARAIGLPRWRDL 159
WP_012030722 111 RRKYQIMPWQEI 122 Dichelobacter nodosus
WP_004142306 105 QKELKLFSWQEV 116 Cardiobacterium hominis
WP_004142308 110 RRNLGLRSWQEI 121 Cardiobacterium hominis
WP_086451615 105 AARAELPKWDDL 116 Marivivens niveibacter
WP_101921543 146 AARAGLPRWQDL 157 Tabrizicola sp. TH137
WP_092361835 142 AMQMGLPRWRDL 153 Cribrihabitans marinus
Q9KMH7       113 RRKYGVTDFDSW 124 Vibrio cholerae
WP_010051354 104 ASRLGLPKWSAF 115 Gemmata obscuriglobus
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