Conserved Protein Domain Family
DUF6402

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pfam19940: DUF6402 (This model is not part of the current CDD release)
Family of unknown function (DUF6402)
This entry represents a member of a biosynthetic gene cluster (BGC). This BGC (BGC0000464) is described by MIBiG as an example of the following biosynthetic class, NRP (non-ribosomal peptide), in particular the xenoamicin A biosynthetic gene cluster from Xenorhabdus doucetiae. This family appears to be predominantly found in proteobacteria.
Statistics
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PSSM-Id: 523797
Aligned: 18 rows
Threshold Bit Score: 250.394
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
jgi:Msip34_0411 112 FDMLDLPKGME-AMGFKYAAYCARRWFNgRAHVIPDKSDTM---------FDEAFVDTDSLKLSWVLGFGDVRKHYDWLL 181
WP_048637117     44 LQVTEIPAAMR-KMGWKRSAKLLDRWFS-SPAWAMPESWKSgrdmpkalyIPSEHCDEETIKMSWVLNYPRVKEKFDELI 121 Brenneria go...
WP_015880070     24 VHVDDIPAAMD-KMKWNTAAKLMRHWFSiKPAFVITDDIRSgnid--plkLKSNQYNDDIVKIDWLLSH-RTWQAADVLV 99  Tolumonas au...
1_pfamImport      1 FYLNQIPDAME-KMGWEMAPKLMRHWFNtKPAYTFTEEVKTkyvrdkaidIPDERINASIIKMEWALKYKQPQDVMSVLI 79 
WP_253940900     24 FPLVQIVIAME-KMGWKVAPQLMKHWFSiSPAVKWTIESKNtlfntdartLKENEYNDTIVKMDWALKYPQVIERFHQLQ 102 Dickeya dada...
WP_093268686     24 FHIDQIPDAMR-KMGWEVSARIMEHWFSiSPAYKMNIDDKRayltgdprlIPESVVDKSIIKMQWALQFVQIQDGIQSLS 102 Vibrio xiame...
WP_139160451     35 IQLTDIPAVMN-KNGFRMGAALMERWFIaPAFSMPISWKGSaraaldnrsLDGHHVDTTTVSMSWALRFGRTQDTFAELT 113 Paracidovora...
WP_012205678     33 FKIRDIPAVMRtRMGWPVAAKLMERWFNgAAYKMPTLAKRSldpy-rlsqLPSVHLDETSVTMKWALGFERVKNAQETLK 111 Delftia
WP_092743143     29 FQLRDISSVMRsRLGWPVAAALMERWFKgAAYQMTKEMKFSepps-rliqLPAQHLDESTVMMEWALGFARVQAAMASLR 107 Paracidovora...
WP_008366096     26 FKITDIPAAMD-KIGWPVSAALMRHWFAgKPWNTPNGGMTRevkt-hqlpPPAQYVEETIVKMNWVVTYPRGQEVIKVLE 103 Pseudomonas ...
jgi:Msip34_0411 182 DselestahENIYNIEARKILVNKLKKFVTSYDy-qYV----GTL------DTLANCGNDKQllhkrfqfqfadvpmldv 250
WP_048637117    122 T--------TRAYSPAGLRQVVKRLKALGWDGR---GAytfgRYNiigrpvVSAREMEQYYQ------------------ 172 Brenneria go...
WP_015880070    100 H--------HTWRSEKGISRLRDLLAKAGWHKGk-sTPtylgSPA------FTARECDAYCQ------------------ 146 Tolumonas au...
1_pfamImport     80 N---------GWSSSAGIDQLKIQLKKEGGKKEl-------gYEK-------DMREIDTFSV------------------ 118
WP_253940900    103 E--------S-WDNHNAIALLKERLVSEGYTPG---GLvklgYSD-------SARVLDASAQ------------------ 145 Dickeya dada...
WP_093268686    103 K--------E-WNSPSGINELRTKLKNAGWNGN---NSvrigDSN-------DTLELEATAQ------------------ 145 Vibrio xiame...
WP_139160451    114 Ra------vLGLSSIQSLNRSKEELFSMLRRAGkf------gAHAatfgegRSVIELHETAH------------------ 163 Paracidovora...
WP_012205678    112 N---------KWNSHAGIEQLKRRIKNQETAHSg-qNIwrfgNLN------NPAKILEDTCQ------------------ 157 Delftia
WP_092743143    108 S---------KWASPAGIAQLKDRVDRQSRGRQd--QCwrlgNLA------LPAKILEDTCQ------------------ 152 Paracidovora...
WP_008366096    104 A---------NWNNSSAQVEIKRHVAAFSAGKApgcYPlrfsGVA------SKAEAFGYSNS------------------ 150 Pseudomonas ...
jgi:Msip34_0411 251 vANLKTAY----QGV-GM-NDLAAAIGNFSLYAAIASAEIRVARYnrydpapwrhclHATVTITHVYVYVIDRYSF-NDP 323
WP_048637117    173 -NNFIAACtfpyNIF-DTlDDMYGALGTFNLKTGLLGTAFRDIDN------------KVYLDTRYIGVYVKDTFEFiNNN 238 Brenneria go...
WP_015880070    147 -VNLRTAGtk-----fDLiDGLFGAIGNGTLKIAVIGKAFNDKG-------------RDLFHVEKTGIYLRDTYDFtGDD 207 Tolumonas au...
1_pfamImport    119 -VNSRRFGsk-----fDTiDDWYGAMGNSNMKVAVKGYVDKLNG-------------KDVFVTEQIGMYLKDTYDFvGAN 179
WP_253940900    146 -VSGVDVGgi-----lDTiNDWYGAIGKANLKLAVRGYTSVHEN-------------KSIFSLESIGVYLKDAYDFvDER 206 Dickeya dada...
WP_093268686    146 -VNRLKVGdy-----lDDlNDWYGAIGNATLKIVVRGQTQVKNDG------------SSIFLVEKYGYYIKDTYDFlSAR 207 Vibrio xiame...
WP_139160451    164 -VNARPVSsnglEKLtDPiDDLYCALGAFTLHVAAEGVISPLKRSgv--------qaTHQVDIHGLAFYIRDCYDFtDD- 233 Paracidovora...
WP_012205678    158 -VNFLVFG----KML-DPmDDFYGAMGESQLNLAVSGLVTTEEPG------------KMSVEIDELGFYLRDCYDFnD-S 218 Delftia
WP_092743143    153 -VNYLSFG----RWS-DPmDDFYGAMGEAQMNVAVSGTVFPQGPG------------KAKVEIEELGFYLRDAYDFnD-G 213 Paracidovora...
WP_008366096    151 -RVVEFNQ----EGD-DDlNDLRGALANFNMRVVAEGDVVIDAQ-------------GVSLVADTIGFYAEDSYDFeD-- 209 Pseudomonas ...
jgi:Msip34_0411 324 ASSa-----sQYLGHWNRRGVIIALNAALADVI------SskafpegqfelgndaryylpsipdhldkpvdiksqlRKSE 392
WP_048637117    239 GSD-------QFLGVWTDNGILTRGKFILMTTSqlnesaKkyy-------------------------------yqLIGN 280 Brenneria go...
WP_015880070    208 ----------EILGVWSKDKVLGKLETVAYMtdp----------------------------------------ieSDFE 237 Tolumonas au...
1_pfamImport    180 ----------EPLGIWSKNGILDKISSVDYAALyatgs---------------------------------wmalwVKYN 216
WP_253940900    207 vmnsidiirpELLGVWSKDRILNKVETVVYFSYyiagl---------------------------------sglleNKYP 253 Dickeya dada...
WP_093268686    208 kwsf--wggsEPLGIWSKNGALNKVESAIYFESysllh---------------------------------ygylaRKFS 252 Vibrio xiame...
WP_139160451    234 ----------QPLGNWDASEVQMLPARHLRL------------------------------------------------- 254 Paracidovora...
WP_012205678    219 DSFv-----sQPLGCWGFQGVDCWGGArpgvnigq---------------------------------etanvppdEAQR 260 Delftia
WP_092743143    214 GNFi-----sQPLGCWGFSGVECGVSTrlnvpvdd---------------------------------avvdeppsTVQG 255 Paracidovora...
WP_008366096    210 NTLi-----sQPLGFWNFDGIALSAGEALSKndmitqqerlvgyqs----------------lfqddatssqtfrqFEEG 268 Pseudomonas ...
jgi:Msip34_0411 393 VFYPVRNRHFRQWRELKKRGGDFVIYSDFKRIKLAKPIVVDL 434
WP_048637117    281 KIAKIHNSDFQHYRDKNNKGGDFVILSDVLWIKQSGRYRLDW 322 Brenneria goodwinii
WP_015880070    238 GYVTVYNRDFRRWQKVHNSGGDFVVYSDIKWRSQK-DLYVEL 278 Tolumonas auensis
1_pfamImport    217 GYVPVINDSFRKWQKKYNEGGDFIVYSDVLWMNPLSQHKIIN 258
WP_253940900    254 GFYPIWNSDFRRWQERNNSGGDFIVFSDVFWFPPSKDNKVIF 295 Dickeya dadantii
WP_093268686    253 GYVPVFNSDFRKWQDKHNSGGDFFVFSDVYWVTAPREQNIIA 294 Vibrio xiamenensis
WP_139160451    255 ----AENASFRQWRDRHQRGGDFIIFSDIHRQKFSAPLTWYF 292 Paracidovorax valerianellae
WP_012205678    261 RKYIVQNKHFLEWRDKNGHGGDFMVLSDVHRMRLPVPLKFSW 302 Delftia
WP_092743143    256 YKYIVQNKDFRQWRGKNHRGGDFMVLSNVHRIRLAFPLKFQW 297 Paracidovorax valerianellae
WP_008366096    269 RYYLIQNSSFQKYRDRHKAGGDFTVYSDILYNKLTAPMVIAI 310 Pseudomonas sp. M47T1
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