Conserved Protein Domain Family
DUF6288

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pfam19805: DUF6288 
Family of unknown function (DUF6288)
This family of bacterial proteins is functionally uncharacterized. Proteins in this family are approximately 800 amino acids in length and they presumably contain PDZ domains.
Statistics
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PSSM-Id: 498294
Aligned: 21 rows
Threshold Bit Score: 431.005
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_110130863   72 RQILVKKVEEGSPAD--GVLEVGDVILGADGTGAKevPLLPLGQyvwIPMANAINEAEA-RNPAILNLLIWRKGETRTVP 148  Coraliomargar...
OYV06787       74 RQISITKVDKGSPAD--GVLAVGDVILGAGGK-----PFSFDPR---TEMGMALTLAESdAGGGKLALTRWRAGQTENVI 143 
OYV07459       70 RQISITKVEAGSPSD--GVFTVGDVILGVGGK-----PFSFDPR---TELGRAITAAETdQGGGKLALTRWRAGKEEQVV 139 
OYV05957       64 VVLKVEEMAPGSPSE--GKFAKGEILTGINGTTLK----GLNPF---VAMGKALTKAEAtDGQMVFDVTSADGKTQRKQA 134 
WP_110130487   66 VEVRVESLIEGSPAD--GKFAVGDILTGVNGVQLQ----GKNPF---VVLGNALTEAEAtNGKLTFDVRSPEGKATRKQT 136  Coraliomargar...
WP_110131651   61 FTMRVGTIEEGSPAAatGKLKKGQIIESINGETLK----DIDPR---IQLAQMITKAEAsDGKLRFAIQG----EAEPVV 129  Coraliomargar...
PQJ29474       50 FTMHITGVEKGSPAEacGKLKKGQIIETINGKTLK----DIDPR---VLLGNMITEAEAkGGIMKMMVKDDPKSAAKEVV 122 
WP_110131001   77 MTMEINNVEEGSPADktGKLKKGQIIESINGVVLK----DFDPR---IILGNIITEAEAtDGVIDLKIKG-----QGNVR 144  Coraliomargar...
WP_105043272  157 STLKIENVEKGSPAElpGKLKKGQIIESINGRTFQ----GTDPR---VVLGNIITKAEAtDGKIEINIKG-----EESVT 224  Rubritalea pr...
PXA05082       44 FVMKINNVEPGSPAAetGQLEKGQVIESINGVRFN--DIDRDPR---IVLAQMITDAEAsDGRIVLDIQD-----LGDVT 113 
WP_110130863  149 IQLEYLGRYSATAPYNCPKSRNVLRKGIAALA---------RQEKVDSVGFGILCLLAANDPTNPDNDKHQALARKWAHE 219  Coraliomargar...
OYV06787      144 VKLPVLGTYSPTAPYGCTKSKRILDQGIKALAqrmadptyeRKQNPITRSLNALALLANGDPAHLPLVKREAQWASGF-- 221 
OYV07459      140 VKLPVLGTYSATAPYGCTKSKRIFEQGIKALAirvaapdyaKTNNPITRSLNALALLASGESEYLSLVKKEAEWASNF-- 217 
OYV05957      135 VTIPVLGIYSKTWPLDCPKSKRIIEDAAAFYAdp-----vkFNQDGIPGALTCLFLLSTGEDKYLPRVKAYFDAFPKDVK 209 
WP_110130487  137 ITIPVYGPYSETWPLDCAKSDKIVREAAEFFSdp-----kwLQDTGMPGALTALFLLSTGDDKYLPTVKAYFDNFPDKVE 211  Coraliomargar...
WP_110131651  130 VQLPILGAYSETWPLNCPKSDKIVRNMADYLAsp-----daNRGISDIG---MIFLLSTGNEKDLEVVGEW--------A 193  Coraliomargar...
PQJ29474      123 VKIPALGAYSKTWPVDCKKSDKIVRACADALAan-----keSVKIGVDG--ALMFLLSTGEEKDLDVVRGWIKKIVEKYK 195 
WP_110131001  145 VNIPVMGAYSDTWPVNCAKSDKIVRNLADLIAeq-----dkPSW----G--SVLFLLSTGEEKDLAVVRRWM-------Q 206  Coraliomargar...
WP_105043272  225 VTIPVLGSYSKTWPLDCEKSDKIVRDFAEVVAke-----gkNQW----G--SILFLLSTGDERDLKVVSGWV-------K 286  Rubritalea pr...
PXA05082      114 VTIPVLGSYSPTWPLNCPKSDKIVRHLADLLAkq-----geNEW----G--SVIFLLSTGNEKDLDVVRGWM-------K 175 
WP_110130863  220 I----KIGDDGAWHSGAKLISLAEYYMATKDKSIFPKLVELAERHARGVSWFGTTGHDFCEQlpSggnGRIG-----GYG 290  Coraliomargar...
OYV06787      222 -----SAESMATWYYGYVMILLSEYVTTTGDTSVMPGLKRLALEASKGQSGVGSWGHKFARP--D---GLLN-----GYG 286 
OYV07459      218 -----TTNGYRTWYYGYVTILVAEYVMATGDKSLLPGLQRLALESAKGQSAVGSWGHNFATP--D---GRLG-----GYG 282 
OYV05957      210 Dig------dHTWNNGYNGIACGEYYLRTGDKSVLPILQYLCDDAKARQKFDCGWTHW------S---NGVSpgyvaG-S 273 
WP_110130487  212 Qig------kHTWNNGYNGIACAEYYLRTGDKSVLPIIQYYADDAERRQKFGVGWIHW------G---DGVNpryvaG-G 275  Coraliomargar...
WP_110131651  194 RkmkpSQ---YAWYLGFAGIPLCEYYLRTGDKEVLPTIQEAVDKAVAGQ-YLDGWAGR------G---GVPRvt--yGYG 258  Coraliomargar...
PQJ29474      196 DkeeiSS---YPWFAGYSGTGLCEYYLRTGDKSILPTIEKLADYLKRTI-YNGSWMGR------G---G-ASyaymgG-G 260 
WP_110131001  207 DieqvGG---ITWEIGYSGIGVCEYYLRTGDKSVLPVIKKATEDLKDRM-YQGGWSGR------G---MPAAftystGTG 273  Coraliomargar...
WP_105043272  287 EmkviST---TAWGVGYEGIGICEYYLRTGDKTALPLIKKAADFLRDTI-YNGGWSGR------P---G-GGfnyqsG-A 351  Rubritalea pr...
PXA05082      176 KrkeiGS---INWAIGMQGIGICEYYLRTGDQSVLPMIQKGADHLRDHI-YNGAWAGR------A---S-GQytyqsG-G 240 
WP_110130863  291 PINCSSALGYLGLSLAREAGVKSEIVEKSHRVQEIYFGHHAFKGTPPYGEHSYGiidGLGDYNGKCAMPALALSLEkDQA 370  Coraliomargar...
OYV06787      287 MMNAPGLPLTISLVMARDAGVKDPAVDKAIELSARLMRFYIGKGAIPYGDHEPWy--QTHEDNGKCGMASVLFNVL-GEA 363 
OYV07459      283 MMNAPGLPLTISLVMARAAGVKDPEVEKAIELSAKLMRFYIGKGSVPYGDHEPWm--ETHEDNGKCGMASVLFQLL-GEA 359 
OYV05957      274 LLNAAGAQMLTTMLLGKECGVN--VDEKTLLNALRYFYRFAGHGGVAYGDHRPEg--GFGS-NGKDGMIAAAMMIA---- 344 
WP_110130487  276 LMNPAGAQVLTTLLLAKECGVD--VDEDTLLGSLRYFYRFAGKGTVPYGDHRGEg--ALGS-NGKDGMIAAAMQIA---- 346  Coraliomargar...
WP_110131651  259 HLNAAGTGVVTFLMLAKECGAD--VPNHTLLGALRHFYRYAGRGSNPYGDNRPEm--GFVD-NGKNGNLAFAMQAA---- 329  Coraliomargar...
PQJ29474      261 HLNAAGLHAVTFLLMAKECGVK--VDEHTLQSSLHHIYRFAGHGDVAYGDHLPEg--GFAG-NGKTEGLAFTMQAA---- 331 
WP_110131001  274 QVHASGIYAMNFLLMARLCGVE--VDDYALRESLKQFYRFGGRGNVAYGNGTPEg--GFRD-NGKTSGLAMAMAVA---- 344  Coraliomargar...
WP_105043272  352 HMNAAGVHCIDFLLLAKTCGVD--VDEATLQGSLRQFFRFSGRGSVPYGDYVPKa--GYRDCNGKTGGLALAMAAA---- 423  Rubritalea pr...
PXA05082      241 HVNASGVHCLTFLLLAKTCGVD--VDEFTLQSSLRHFYRYSGRGSVPYGDYTSKa--GYGDCNGKTSGLAMAMAAA---- 312 
WP_110130863  371 DKAKFFARKAALSTdGKRGYAHGGPFFGQMFHPLGADVVG------------------PAAANLQFREI-RWHLDLKRSW 431  Coraliomargar...
OYV06787      364 KGAEFFSRMSVASHgAERDCGHTGNFFNVFWSLPSVAQSG------------------PQATGAWMKEFgAWYFDLARRP 425 
OYV07459      360 KGSEFFARMSLSSHgPERDCGHTGNFFNLLWSLPAVAQNG------------------PQATGAWMREFgAWNFDLARRW 421 
OYV05957      345 --SG--AEGDTTIYrQAAKCLAMTMIESYPGLAMGHGDEGrsdgiwtslinshlvkekPALYREAMDRL-TWWHDLSREP 419 
WP_110130487  347 --CG--SSGDTTIYeEARKHLGLSMMTSYSGLVVGHGDKGrgdaiwrslvshylmdlrPEQYRTAMDRL-KWWHDLSRLP 421  Coraliomargar...
WP_110131651  330 --AALTPNGEDSVYaKARDVAAMTAFYTTTFMLHGHTGGGigeiwrsas-mgllrekkPKQYRDFMDKR-LFHYELSRRF 405  Coraliomargar...
PQJ29474      332 --ANLHPDGEKSIYaKARNVSGTKAFYSTSWLFHGHTGGGigeywrgpa-mgvvrdkrPAEYQSFMDER-RWMYELGRTH 407 
WP_110131001  345 --AQLTPEGENSVYaQARDNSAMKAFYATNWFHAAHTGGGmgeiwhhga-malmrekrPIPYRSYHDTR-RWVMDLSRRH 420  Coraliomargar...
WP_105043272  424 --SRLTPGGEESIYgKAVQVNAMKSYYGTAAFGTGHTGGGigeiwksas-mglmvekrPSQYRQYIESR-RWSLELSRRF 499  Rubritalea pr...
PXA05082      313 --SRLTPGGDKSIYaQAAQINAMKGYYGINTYHVGHTGGGlgeiwksaa-mglmmderPEQYRQYLDAR-RWILELSRRH 388 
WP_110130863  432 DHSRIYDARSnpYED----------FSYWATAMLAYALPLKQLVITGR 469  Coraliomargarita sinensis
OYV06787      426 DGTFVHLGPP--EPGnds----yanWDCTGAYLLAYALPLKKLVITGK 467 
OYV07459      422 DGTFLHQGPP--EPQpds----ysgWDSTGAYLLSYAMPLKKIFLTGK 463 
OYV05957      420 GGSIGIGTME--WGDgev-------gssGPGIGLSYTAPLQTLRITGA 458 
WP_110130487  422 SGALEFATLE--WRNgdl-------gssGAGVGLSYTAPRKTLRITGA 460  Coraliomargarita sinensis
WP_110131651  406 DGSFGILGGG--GYDdp---------kWGAAYGWAYTVPRQQLRIFGA 442  Coraliomargarita sinensis
PQJ29474      408 DGVFGWVSGW--NVSydkt--glegRGFANFIPLIYTLPRKHLRLYGA 451 
WP_110131001  421 DGSVAIEGMD--DRYnrsltdasagRDWGTFFALTYTYPRKNLQLWGA 466  Coraliomargarita sinensis
WP_105043272  500 HGGFGIAGTP--DGNydqalgekmkKTWGTYYALNYTLPRKKLHLFGA 545  Rubritalea profundi
PXA05082      389 TGGIGIGGGK--DGNydvatgensdKGWGSYFALNYTLPRKQLYLFGA 434 
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