Conserved Protein Domain Family
MARF1_LOTUS

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pfam19687: MARF1_LOTUS (This model is not part of the current CDD release)
MARF1 LOTUS domain
This is the LOTUS domain which is repeated in the C-terminal of of Meiosis regulator and mRNA stability factor 1 (MARF1) protein, an essential regulator of oogenesis required for completion of meiosis and retrotransposon silencing, key to maintain germline integrity. This domain provides RNA-binding properties to this protein, acting as an adapter to recruit targets for the effector domain NYN (pfam01936) at the N-terminal (RNase activity).
Statistics
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PSSM-Id: 523734
Aligned: 4 rows
Threshold Bit Score: 267.627
Created: 20-Feb-2025
Updated: 28-Apr-2025
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AWP06194      749 MLSSEIICILQDAPASCLPLFKFTEIYEKKYSRKLAVGDLYRLPEVVTVREQGGSRLVCLLPSSQIRQSPLGSSQSQEGS 828  turbot
XP_027324807  653 LLSSEAISILQDAPACCLPVFKFTEIYEKKFGHKLIVSDLYKLTDTVAIRDQGSGRLVCLLPSSQARQSPLGSSQSHDGS 732  mallard
XP_023620881  861 LLSGETMSILQDAPACCLPLLKFTDIYEKKFGHKLNVSDLYKLTDTVAIREHGNGRLVCLLPSSQARQSPLGSSQSHDGS 940  little brown bat
XP_006136349  611 QFSSETMTILQDAPACCLPIFKFTEIYEKKFGHKLIASDLYKLTDTVAIRDQGNGRLVCLLPSSQARQSPLGSSQSHDGS 690  Chinese soft-...
AWP06194      829 SsASGSPVVFEELEYHEPVCRQHYAQQDFSEADFDPDSYKIPFVVMSLSTLATEVHSLLQSHEGTLPLL 897  turbot
XP_027324807  733 S-ANCSPIIFEELEYHEPVCKQHCLNKDFIEHEFDPDSYRIPFVILSLKTFAPQVHSLLQTHEGTVPLL 800  mallard
XP_023620881  941 S-TNGSPIIFEELEYHEPVCRQHCSNKDFSEHEFDPDCYQIPFVILSLKMFGPQVHSLLQTHEGTVPLl 1008 little brown bat
XP_006136349  691 S-ANCSPIIFEELEYHEPICKQHCLNKDFSEHEFDPDSYQIPFVILSLKTFAPQVHSLLQTHEGTVPLL 758  Chinese soft-shelled turtle
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